G1324665



Basic Information


Item Value
gene id G1324665
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72633533 ~ 72634566 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1512409
ggggggggggggcagcactCTCCGAAAGGCACAGGCGGGCTCCAAAACGAATACCAGTGGTAGCAGTTAGGGTCCAAGGGAATTCAACTCCAGGCCTGGAACGACAAAGTACTCCTGGTTTAGTCCATTGATTGATTGAATCATGTCTCTGATTGGACAGAGAGTCTAATCATCTGGCGATGTCATCACCGGGTTTTAATTAGTCTGAttagaaggagcgagagagaaagcgacCCAGGAGACTTGCAGTCCTCCCGGACTGGAGTGGACTGTCCCTGTTGTAGCAGGGCAGAAActgaagagaggagaaacagcaTATACAAAAATATCCTTTAGAATAGAATTTACAAAAAGAGCGATTATTATTACACAATCTTGAGCCCGTTTGCCATCTCAGCAAGAGGACGGCGCTATGCCAGGTCCAGCTGATTCAAAACCTTTACACGTCATTAGAACAAAACCCTGCAATATTTGCTAGAACAAGAGGGCAAAACATTTACAGTAGGAGGAACattggggagagggaggggtgtcaTGGACAGACTAGTTACATCTTCTGTTAATACGAATATTTAGAGAGAGCACATTAAATATTATATACCTAGTTGCCCTGTACATATAGAAAACAATGCATATATAGCTATCGAGAAGTTAGCACAAAAAAATGAATCAAAATAATATAACAGTAGTCCTCTGTCCCTAGTGATACACGTCTTCTTCTGTAATGTCTTAATACAAGTCTAAAAGTACAGAAGATAAGAAAGTCAAGTATTTCTCTGGAATAGAAAACTAAACCAAAAGATGAATCGGGATCCAAATGTGACGGATTGTTTCGGACTAAGAGTCAAATCCTCACTTGCACTTAAGACAAATTCTCTCCCATTCACATCTTCATGACTAAGTGAAAATTCAACTTAAGTGGAAGTTAGGATTTGCCCCCAAAAGGGAATAAGGCAGGTTTGTATGGTCCCAGCAGAGAAGGAGATAAGATAATtgtacatcccaaatgacacactattccctaagtagtgcac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1512409 True 1034 lncRNA 0.42 1 72633533 72634566

Neighbor


gene id symbol gene type direction distance location
LOC118938847 NA coding downstream 41360 72591662 ~ 72592173 (-)
LOC110531910 gsap coding downstream 100395 72500414 ~ 72533138 (-)
LOC110531900 LOC106576463 coding downstream 140246 72481939 ~ 72493287 (-)
fgl2a fgl2 coding downstream 206576 72421569 ~ 72426957 (-)
LOC110490625 LOC106596128 coding downstream 318272 72306866 ~ 72315261 (-)
LOC110499730 LOC106609820 coding upstream 100450 72735016 ~ 72737438 (-)
LOC110490677 LOC106576365 coding upstream 220456 72855022 ~ 72916247 (-)
LOC118938848 NA coding upstream 275538 72910104 ~ 72914835 (-)
LOC110490803 LOC106591178 coding upstream 324650 72959216 ~ 73142970 (-)
LOC118938934 LOC106594503 coding upstream 702459 73337025 ~ 73338361 (-)
G1324662 NA non-coding downstream 6177 72625943 ~ 72627356 (-)
G1324661 NA non-coding downstream 9670 72623540 ~ 72623863 (-)
G1324658 NA non-coding downstream 18626 72614408 ~ 72614907 (-)
G1324656 NA non-coding downstream 20366 72612562 ~ 72613167 (-)
G1324616 NA non-coding downstream 34000 72598943 ~ 72599533 (-)
G1324706 NA non-coding upstream 80075 72714641 ~ 72715235 (-)
G1324730 NA non-coding upstream 124600 72759166 ~ 72760129 (-)
G1324749 LOC107569940 non-coding upstream 150898 72785464 ~ 72823893 (-)
G1324750 NA non-coding upstream 151157 72785723 ~ 72786124 (-)
G1324790 NA non-coding upstream 234742 72869308 ~ 72869829 (-)
G1324604 NA other downstream 152364 72480405 ~ 72481169 (-)
G1324569 NA other downstream 225764 72407421 ~ 72407769 (-)
G1324512 NA other downstream 296549 72335360 ~ 72336984 (-)
G1324805 NA other upstream 270883 72905449 ~ 72906351 (-)
G1325752 NA other upstream 1040772 73675338 ~ 73677653 (-)
G1325780 NA other upstream 1100115 73734681 ~ 73735097 (-)
G1325863 LOC106584099 other upstream 1367881 74002447 ~ 74002749 (-)
LOC110513406 LOC106576618 other upstream 1533577 74167198 ~ 74213128 (-)

Expression



Co-expression Network