G1324102


Basic Information

Item Value
gene id G1324102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72633535 ~ 72634713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511621
gcactacttagggaatagtgtgtcatttgggatgtacaATTATCTTATCTCCTTCTCTGCTGGGACCATACAAACCTGCCTTATTCCCTTTTGGGGGCAAATCCTAACTTCCACTTAAGTTGAATTTTCACTTAGTCATGAAGATGTGAATGGGAGAGAATTTGTCTTAAGTGCAAGTGAGGATTTGACTCTTAGTCCGAAACAATCCGTCACATTTGGATCCCGATTCATCTTTTGGTTTAGTTTTCTATTCCAGAGAAATACTTGACTTTCTTATCTTCTGTACTTTTAGACTTGTATTAAGACATTACAGAAGAAGACGTGTATCACTAGGGACAGAGGACTACTGTTATATTATTTTGATTCATTTTTTTGTGCTAACTTCTCGATAGCTATATATGCATTGTTTTCTATATGTACAGGGCAACTAGGTATATAATATTTAATGTGCTCTCTCTAAATATTCGTATTAACAGAAGATGTAACTAGTCTGTCCAtgacacccctccctctccccaatGTTCCTCCTACTGTAAATGTTTTGCCCTCTTGTTCTAGCAAATATTGCAGGGTTTTGTTCTAATGACGTGTAAAGGTTTTGAATCAGCTGGACCTGGCATAGCGCCGTCCTCTTGCTGAGATGGCAAACGGGCTCAAGATTGTGTAATAATAATCGCTCTTTTTGTAAATTCTATTCTAAAGGATATTTTTGTATAtgctgtttctcctctcttcagTTTCTGCCCTGCTACAACAGGGACAGTCCACTCCAGTCCGGGAGGACTGCAAGTCTCCTGGgtcgctttctctctcgctccttctaaTCAGACTAATTAAAACCCGGTGATGACATCGCCAGATGATTAGACTCTCTGTCCAATCAGAGACATGATTCAATCAATCAATGGACTAAACCAGGAGTACTTTGTCGTTCCAGGCCTGGAGTTGAATTCCCTTGGACCCTAACTGCTACCACTGGTATTCGTTTTGGAGCCCGCCTGTGCCTTTCGGAGagtgctgcccccccccccccccccccctctcccatcatcagcagcagcagctggAGCACGTGTAGCGACATGCTCAGCCGTGTTGGTTGGTCCACTCCTCTTAGAGActgcttgcatcccaaatggcaccatattccctatatagtccactacttttgaacagacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511621 True 1179 lncRNA 0.43 1 72633535 72634713

Neighbor

gene id symbol gene type direction distance location
LOC110531894 LOC106598741 coding upstream 152094 72416050 ~ 72481441 (+)
LOC110518729 LOC106599346 coding upstream 228897 72381871 ~ 72404638 (+)
LOC110516399 LOC106592662 coding upstream 286619 72340081 ~ 72346916 (+)
LOC118938846 tsn8 coding upstream 297672 72322986 ~ 72335863 (+)
LOC110490623 LOC106597683 coding upstream 337231 72287164 ~ 72370434 (+)
LOC110490361 LOC106609821 coding downstream 107480 72742193 ~ 72850175 (+)
LOC110499728 NA coding downstream 191800 72826513 ~ 72829520 (+)
LOC118938849 LOC106609835 coding downstream 537507 73172193 ~ 73254659 (+)
LOC110517131 LOC105024897 coding downstream 623810 73258523 ~ 73536948 (+)
LOC118936425 lmo3 coding downstream 1042371 73677084 ~ 73803344 (+)
LOC110515111 LOC106561326 non-coding upstream 72 72551117 ~ 72734470 (+)
G1324137 NA non-coding upstream 18444 72614450 ~ 72615091 (+)
G1324131 NA non-coding upstream 39584 72593648 ~ 72593951 (+)
G1324115 NA non-coding upstream 64961 72568248 ~ 72568574 (+)
G1324112 NA non-coding upstream 68583 72564425 ~ 72564952 (+)
G1324153 NA non-coding downstream 48224 72682937 ~ 72683155 (+)
G1324172 NA non-coding downstream 71415 72706128 ~ 72706445 (+)
G1324179 NA non-coding downstream 95107 72729820 ~ 72730998 (+)
G1324185 NA non-coding downstream 118574 72753287 ~ 72753757 (+)
G1323962 NA other upstream 442372 72190423 ~ 72191163 (+)
G1322763 NA other upstream 1696390 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1785591 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2729877 69900944 ~ 69903658 (+)
G1324156 LOC106576365 other downstream 218853 72853566 ~ 72856022 (+)
G1324195 NA other downstream 226107 72860820 ~ 72865809 (+)
G1324240 NA other downstream 270997 72905710 ~ 72906089 (+)

Expression


Co-expression Network