G1324219


Basic Information

Item Value
gene id G1324219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72834435 ~ 72834710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511821
taacaattcctcaACAAAACCTGATATCTAACAATTCctcaacaaaacctaatatctaacagatTCCATAagaaaacctaatacacacaatctagtaaaggaatgagATAATAGTATATAAATaaatggatgagcagtgacagaacggctaagatgcaatagatggtaaagaatagatagtgaagaatacagtatatacatatgagatgagtaatgcga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511821 True 219 lncRNA 0.31 2 72834435 72834710

Neighbor

gene id symbol gene type direction distance location
LOC110499728 NA coding upstream 4915 72826513 ~ 72829520 (+)
LOC110515111 LOC106561326 coding upstream 99965 72551117 ~ 72734470 (+)
LOC110531894 LOC106598741 coding upstream 352994 72416050 ~ 72481441 (+)
LOC110518729 LOC106599346 coding upstream 429797 72381871 ~ 72404638 (+)
LOC110516399 LOC106592662 coding upstream 487519 72340081 ~ 72346916 (+)
LOC118938849 LOC106609835 coding downstream 337510 73172193 ~ 73254659 (+)
LOC110517131 LOC105024897 coding downstream 423813 73258523 ~ 73536948 (+)
LOC118936425 lmo3 coding downstream 842374 73677084 ~ 73803344 (+)
LOC118938850 NA coding downstream 860129 73694833 ~ 73698637 (+)
LOC118938852 NA coding downstream 1192380 74027090 ~ 74132032 (+)
G1324197 NA non-coding upstream 56502 72777465 ~ 72777933 (+)
G1324193 NA non-coding upstream 62853 72771271 ~ 72771582 (+)
G1324187 NA non-coding upstream 70717 72762475 ~ 72763718 (+)
G1324185 NA non-coding upstream 80678 72753287 ~ 72753757 (+)
G1324179 NA non-coding upstream 103437 72729820 ~ 72730998 (+)
G1324222 NA non-coding downstream 34498 72869208 ~ 72870083 (+)
G1324224 NA non-coding downstream 36757 72871467 ~ 72874048 (+)
G1324252 NA non-coding downstream 100402 72935112 ~ 72936085 (+)
G1324263 NA non-coding downstream 116155 72950865 ~ 72951079 (+)
G1324269 NA non-coding downstream 119247 72953957 ~ 72954167 (+)
LOC110490361 LOC106609821 other upstream 8395 72742193 ~ 72850175 (+)
G1323962 NA other upstream 643272 72190423 ~ 72191163 (+)
G1322763 NA other upstream 1897290 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1986491 70843945 ~ 70847944 (+)
G1324156 LOC106576365 other downstream 18856 72853566 ~ 72856022 (+)
G1324195 NA other downstream 26110 72860820 ~ 72865809 (+)
G1324240 NA other downstream 71000 72905710 ~ 72906089 (+)
G1325337 NA other downstream 1021634 73856344 ~ 73856674 (+)

Expression


Co-expression Network