Gene
RNA
| Item | Value |
|---|---|
| gene id | G1324792 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 72872231 ~ 72872570 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable JmjC domain-containing histone demethylation protein 2C, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1512562 | True | 292 | lncRNA | 0.55 | 2 | 72872231 | 72872570 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499730 | LOC106609820 | coding | downstream | 134793 | 72735016 ~ 72737438 (-) |
| LOC118938847 | NA | coding | downstream | 280058 | 72591662 ~ 72592173 (-) |
| LOC110531910 | gsap | coding | downstream | 339093 | 72500414 ~ 72533138 (-) |
| LOC110531900 | LOC106576463 | coding | downstream | 378944 | 72481939 ~ 72493287 (-) |
| fgl2a | fgl2 | coding | downstream | 445274 | 72421569 ~ 72426957 (-) |
| LOC118938848 | NA | coding | upstream | 37534 | 72910104 ~ 72914835 (-) |
| LOC110490803 | LOC106591178 | coding | upstream | 86646 | 72959216 ~ 73142970 (-) |
| LOC118938934 | LOC106594503 | coding | upstream | 464455 | 73337025 ~ 73338361 (-) |
| mgst1.1 | LOC106590880 | coding | upstream | 1011713 | 73884283 ~ 73902168 (-) |
| LOC118938851 | LOC106575061 | coding | upstream | 1018348 | 73890918 ~ 73902131 (-) |
| G1324790 | NA | non-coding | downstream | 2402 | 72869308 ~ 72869829 (-) |
| G1324749 | LOC107569940 | non-coding | downstream | 48338 | 72785464 ~ 72823893 (-) |
| G1324750 | NA | non-coding | downstream | 86107 | 72785723 ~ 72786124 (-) |
| G1324730 | NA | non-coding | downstream | 112102 | 72759166 ~ 72760129 (-) |
| G1324706 | NA | non-coding | downstream | 156996 | 72714641 ~ 72715235 (-) |
| G1324793 | NA | non-coding | upstream | 309 | 72872879 ~ 72873375 (-) |
| G1324794 | NA | non-coding | upstream | 2113 | 72874683 ~ 72875310 (-) |
| G1324812 | NA | non-coding | upstream | 44458 | 72917028 ~ 72918638 (-) |
| G1324823 | NA | non-coding | upstream | 69767 | 72942337 ~ 72942639 (-) |
| G1324604 | NA | other | downstream | 391062 | 72480405 ~ 72481169 (-) |
| G1324569 | NA | other | downstream | 464462 | 72407421 ~ 72407769 (-) |
| G1324512 | NA | other | downstream | 535247 | 72335360 ~ 72336984 (-) |
| G1324805 | NA | other | upstream | 32879 | 72905449 ~ 72906351 (-) |
| G1325752 | NA | other | upstream | 802768 | 73675338 ~ 73677653 (-) |
| G1325780 | NA | other | upstream | 862111 | 73734681 ~ 73735097 (-) |
| G1325863 | LOC106584099 | other | upstream | 1129877 | 74002447 ~ 74002749 (-) |
| LOC110513406 | LOC106576618 | other | upstream | 1295573 | 74167198 ~ 74213128 (-) |
