XLOC_032188 (CR628341.3)


Basic Information

Item Value
gene id XLOC_032188
gene name CR628341.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 38518219 ~ 38590172 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062888
ATTGATTTCTACACCGATTACTTCATCTCTCTTCACAAACAACGGAGTGCAAACGCGATGTACTgAAAAGCATATCAGCTCAGCACTCATGTTCAGCCTTCATGTTATCACTTTACCAATAAACAGGAACAGCGGCCGACATCTAACAGCAGGAAGCTGAACAACAAGGAGTTGAGATGAGAGGAAGAGCTGCCTTCTTTTTGTGTACATTTAAGATGTGGCTGATACGTTCTCTCCGTTCTGGATGCGGATCGTTTAATGTCTGGGTTGTTCCTTCCATCGGTTCTGCTTTAATGGACTCTGAAATTCCATCAGTAAAGCTGTCCTTCCCCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117333

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062888 True 333 lncRNA 0.44 3 38518219 38590172

Neighbor

gene id symbol gene type direction distance location
XLOC_032187 gabrb3 coding upstream 4641 38381957 ~ 38513578 (+)
XLOC_032186 CR405707.1 coding upstream 141008 38377091 ~ 38377211 (+)
XLOC_032185 NA coding upstream 157776 38358681 ~ 38360443 (+)
XLOC_032184 AL935047.1 coding upstream 430608 38087495 ~ 38087611 (+)
XLOC_032183 oca2 coding upstream 463368 37894220 ~ 38054851 (+)
XLOC_032189 atp10a coding downstream 36512 38626684 ~ 38730530 (+)
XLOC_032190 ube3a coding downstream 183204 38773376 ~ 38790064 (+)
XLOC_032191 stk35l coding downstream 255504 38845676 ~ 38861349 (+)
XLOC_032192 bin2b coding downstream 289789 38879961 ~ 38894366 (+)
XLOC_032193 slc48a1b coding downstream 305986 38896158 ~ 38902498 (+)
XLOC_032178 NA non-coding upstream 1042118 37470116 ~ 37476101 (+)
XLOC_032176 BX324166.1 non-coding upstream 1183256 37334559 ~ 37334963 (+)
XLOC_032194 NA non-coding downstream 363309 38953481 ~ 38955126 (+)
XLOC_032204 NA non-coding downstream 780163 39370335 ~ 39378734 (+)
XLOC_032208 NA non-coding downstream 942306 39532478 ~ 39541448 (+)
XLOC_032209 AL954698.2 non-coding downstream 1076175 39666347 ~ 39667572 (+)
XLOC_032210 AL954698.1 non-coding downstream 1110028 39700200 ~ 39717558 (+)

Expression


Co-expression Network