G1324812


Basic Information

Item Value
gene id G1324812
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72917028 ~ 72918638 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1512594
TGCTGTGAGCTTATGGATGTTTAGTTTACCCACCTGCCCTTCAAACTAGTACTCATATAGCGTGGTGCAGTGTGGCTGAACCACACACAAACCCTCCCCTGGTACCATACTTTTGGGTAAGAAAACACacatgcgaacacacacacattcaacatCTAGTTCTAGAATGCTGTAAATCAATTTACCCCTCTTCACCTCCTTTCCCATGGCAACGGTAAGTTGTCAGAGAAGCCTGCTCCTGAGCTCTGGTTTTTAAGCCTAAatgaaaataacaaataataactAGTTGCTTAATTTATACTATGCAAACATAAACTCCTAGCTGTTCCAGATAAAGTACCAACTATGGTTTCATTCAGTTGAAAAGCGTTTTTATCTGAGAGAATTTAGTTTGGAAGTTCTCAAAAGAACCTCTTTAGTATTAAAATAAATTGGTTTTCATTCTGAACCAACCTACTTTGCCTGATGGGGAGCAAAGATGTGACAAATGAGTTAAAGAATTTCATGTCTCATATCATTATGtagaaatacactatatatacaaaagtatgtggacaccccttcaaattagtggattcggctatttcagccacacccgttgctgacaggtgtataaaatcgagcacacagccatgcaatctccatagacaaacattggcagtagaatggccttactgaagagctcagtgactttcaacgtggcactgtcataggatgccacctttccaaaaagtcttgtttgtcaaatttctgccctgctagagctgccccggtcaactgtaagtgctgtaatTGCGAAGTGGAAacgagcttcatgaaatgggtttccatggctaagcagccacacacaagcctcaaatcaccatgcgcaattccaagcgttggctggagtggtgtaaagctcgccgccattggactctggagcaggggaaacacgttctctggagatgaatcacgcttcaccatctggtagtcctatggacgaatctgtgtttggcagatgccaggagtatgctacctgccccaatgcatagtgccaactgtaaagtttggtggaggaggaattgggctagtccccttagttccagtgaagtgaaatcttaacgctacagcatacaatgacattctagacagttctgtgcttccaacgttgtggcaacagtttgaggaaggatctttcctgttttagcatgacaatgcctctgtgcacaaagcgaggtccatacagaaatggtttgtcgagatccacgtggaagaacttgactggccttccAAGAagtgtagaggctgttatagcagcacagtgggggaccaactccatattaatgcccatgattctggaatgagaacaggtgtccacatactcttggtcatgtagtgtaccataAGCATCATGCCTCAACTCCCGAAACATAAAACCATTTCCCCCTATCCTGGCACACACCAGATTTAACATTCACATTTTTACCAATCCTCTTTTAAGGAACAGGCTTCTGAAGGGAAATTTGCTGACAGTTTTCATGTGCGGATAATCTGGAAAGATTGAGGCAAACTTTCCTCTTTCCTTTGAAGTGCCCAGTCCAGTTAATGATTCTGCAAGGTTAATGGAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1512594 True 1611 lncRNA 0.43 1 72917028 72918638

Neighbor

gene id symbol gene type direction distance location
LOC110490677 LOC106576365 coding downstream 781 72855022 ~ 72916247 (-)
LOC118938848 NA coding downstream 2193 72910104 ~ 72914835 (-)
LOC110499730 LOC106609820 coding downstream 179590 72735016 ~ 72737438 (-)
LOC118938847 NA coding downstream 324855 72591662 ~ 72592173 (-)
LOC110531910 gsap coding downstream 383890 72500414 ~ 72533138 (-)
LOC110490803 LOC106591178 coding upstream 40578 72959216 ~ 73142970 (-)
LOC118938934 LOC106594503 coding upstream 418387 73337025 ~ 73338361 (-)
mgst1.1 LOC106590880 coding upstream 965645 73884283 ~ 73902168 (-)
LOC118938851 LOC106575061 coding upstream 972280 73890918 ~ 73902131 (-)
LOC118938901 NA coding upstream 1001815 73920453 ~ 73929800 (-)
G1324794 NA non-coding downstream 41718 72874683 ~ 72875310 (-)
G1324793 NA non-coding downstream 43653 72872879 ~ 72873375 (-)
G1324792 NA non-coding downstream 44458 72872231 ~ 72872570 (-)
G1324790 NA non-coding downstream 47199 72869308 ~ 72869829 (-)
G1324823 NA non-coding upstream 23699 72942337 ~ 72942639 (-)
G1324828 NA non-coding upstream 30527 72949165 ~ 72949371 (-)
G1324829 NA non-coding upstream 32663 72951301 ~ 72951545 (-)
G1324831 LOC105030512 non-coding upstream 35467 72954105 ~ 72954541 (-)
G1324832 NA non-coding upstream 36261 72954899 ~ 72955106 (-)
G1324805 NA other downstream 10677 72905449 ~ 72906351 (-)
LOC110531900 LOC106576463 other downstream 433600 72481939 ~ 72493287 (-)
G1324604 NA other downstream 435859 72480405 ~ 72481169 (-)
G1324569 NA other downstream 509259 72407421 ~ 72407769 (-)
G1325752 NA other upstream 756700 73675338 ~ 73677653 (-)
G1325780 NA other upstream 816043 73734681 ~ 73735097 (-)
G1325863 LOC106584099 other upstream 1083809 74002447 ~ 74002749 (-)
LOC110513406 LOC106576618 other upstream 1249505 74167198 ~ 74213128 (-)
LOC110511321 lemd3 other upstream 1306778 74218902 ~ 74256009 (-)

Expression


Co-expression Network