XLOC_032191 (stk35l)


Basic Information

Item Value
gene id XLOC_032191
gene name stk35l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 38845676 ~ 38861349 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062894
CTCTCAGTTCATTCAAGATTCATTCCGTTCGGACCAGATGCAGGACGGTCGCTGAATCGCCGTATGAAAACAAACCAGATGTCAGCTAATATTTAAGCGCTGCTGAACTTCCTCGAGCCCTGGAGCTATGAACGCGGAAGATATTTGCCAACGCACGCACACAACGTGAGGAGGCGCGATGAACGCAAAGGACCGAGAGCGGCGCCGGACGCGCAAAGCTGGCAAACGAGCCGAAAGCGCGAGTGTCCTGCGCTCGCTCAGCGTCGACAACATTGACGAGGAGAATGAAACAATGGCAGGCGAGCTGGACATGGGCAAACATGGCAGCCTGGAGAGGCGGATCATTGCTCCGCGGTACAGCTTGCTCCGACATGCTGGCTGTCAATCCTCAGGACCGACCAGACGCTCTGGAGCTGCACAATAGGATGGGACAGGTCACTTGCGCGGCGTGAACTTTGACCTCTGTCCTAAAAGCATTGCACACACAGGTTTACCTGTTCCACGAGAGACCAGAAGGGACTGCATTGCTTGGAAAGCTGTGAATCTTCCACTGCTGATTTAATGTGAAGAGTACAAAGTACTCAACTTGGACACCAATACAATGTTTGCCACATGtagattttttgtttacagtAGTGATTTAAACAAATCATTCATCAAGCCCAGAAGTGTTCAGCCAAATTCAATCACCGGTTACGTCACTAAGAGTGAAGTAATGCTAAAAAAATGTTGAGATACAGTAAGTACAATCAAGCTAAAACTTGCAAGCT
>TCONS_00062895
ATTCCGTTCGGACCAGATGCAGGACGGTCGCTGAATCGCCGTATGAAAACAAACCAGATGTCAGCTAATATTTAAGCGCTGCTGAACTTCCTCGAGCCCTGGAGCTATGAACGCGGAAGATATTTGCCAACGCACGCACACAACGTGAGGAGGCGCGATGAACGCAAAGGACCGAGAGCGGCGCCGGACGCGCAAAGCTGGCAAACGAGCCGAAAGCGCGAGTGTCCTGCGCTCGCTCAGCGTCGACAACATTGACGAGGAGAATGAAACAATGGCAGGCGAGCTGGACATGGGCAAACATGGCAGCCTGGAGAGGCGGATCATTGCTCCGCGGTACAGCTTGCTCCGTGAAGTTGGCAGGGGCAGCTATGGCGTTGTGTACGAAGCCATTGCCCGTAAATCAGGTGCGAAAGTGGCAGTGAAAAAGCTGCGCTGTGACGCGCCCGAGAATGTGGAGCTGGCGCTGGCCGAGTTCTGGGCTCTGACCAGCCTGGAGAAGCGCCACGAGAACGTGGTGCAGCTGGAGGAGTGTGTGCTCCAAAAAAACGGGATGGCCCAGAAAATGAGCCATGGCAATAAGCGTTCAAAGCAGTATTTGAGGCTGGTGGAGACCTCGCTGAAAGGTGAGCGTGTGCTGTCGTGTCCTGATGAGCCCTGCTACCTGTGGTTTGTCATGGAGTTTTGTGAAGGAGGAGATCTGAATCAGTTCATCCTGTCCCGCCAGCCTGATCCCCACACCAACGCCAGCTTCATGATGCAATTGAGCAGCGCTGTGGCGTTCCTTCACCAAAACAACATTGTTCATAGAGACCTCAAACCAGATAACATCCTTATCTCGGAAAGTTCTGGAGCGCCTGTGTTGAAGGTGGCAGATTTCGGACTGAGCAAAGTGTGTGCTGGTCTGAGTGCCGGAGTACGGGATGCAGAAGAGGGACTTGACAAAAACAGGAACGGTGTTGTTAACATCAATAAGTTCTGGCTCTCGTCGGCATGCGGATCAGACTTTTACATGGCACCAGAGGTTTGGGAAGGACATTACACAGCCAAAGCGGACATTTTTGCTCTGGGTATTATCATCTGGGCCATGATCGAGAGAATCACTTTCATTGATGCCGAGTCCAAACGGGAACTACTTGGGACGTATGTGCGGCAGGGGTCTGACATCGTCCCGGTTGGGGAGGCACTCCTGGAGAACCCAAAGATGGTATTGAGTATTCCCCAGCGCAGGCGCTCGCACATGTCCGAGGCACTCCGAAAACTTTTAAAGGACATGCTGGCTGTCAATCCTCAGGACCGACCAGACGCTCTGGAGCTGCACAATAGGATGGGACAGGTCACTTGCGCGGCGTGAACTTTGACCTCTGTCCTAAAAGCATTGCACACACAGGTTTACCTGTTCCACGAGAGACCAGAAGGGACTGCATTGCTTGGAAAGCTGTGAATCTTCCACTGCTGATTTAATGTGAAGAGTACAAAGTACTCAACTTGGACACCAATACAATGTTTGCCACATGtagattttttgtttacagtAGTGATTTAAACAAATCATTCATCAAGCCCAGAAGTGTTCAGCCAAATTCAATCACCGGTTACGTCACTAAGAGTGAAGTAATGCTAAAAAAATGTTGAGATACAGTAAGTACAATCAAGCTAAAACTTGCAAGCTTTTTATTAGTCTTAACAGGGGACCGGGACTTTAAAATTCCTTTAGCAGAGCTTGCCTAGTTGCTCATCTTCTCAAAACAATCCTTTAAAATTAACAAagtatttcaattattttatttgataattaaagtTGTGTAAGCAGTGAAGCCTTCAGTATAATAACACAGTAACACATTAAGACACTCACAAAATACTTGACTACATTTTTGTGCCCAACCATATAAAGAAATGCACATCACATCAAAATAATTCCATTTCCATATTCTCATAGTCTTATTCTTGGGTCCAACCTATGGGTTCTCCATACTTAATCGGTGTTGTGATAAGATCGTCTAACACCATGTGAATCAAAAGCAAACTTTTATATCTTGATTTTGTTTCTACTCACATGCTCATGATCTTAAGCCCAATATTGAGATTTTATTTTCTCCTTGAATGCAGATCGACCCTGGTGCCTTGAAGTCTAGTGatagttttgtttttcagctTTATCTTTTAAATATGCAGTGTATTGTCAGAGCTTTTACACATTACACTTTACATTTTAGGCATGTGCAGTTTAACCTTTTaggtatggagccagatcagtctcacaaatcatacatttacaaaatataattcatacatccacaacacaattcatattttaaaaaaacacaattcaaaaatacacaaatccatttaataaattcaaaaacaaatgaaaaatacataaatccaattaataaattaaactattcaaaaatacacacagccaattggtaaataaaaaaaacaataaaaaaatacacatttaattctctaaaaacaatttaaaaaatgtcaattccaattcgtaaattcaaaaaattattcaaaaatagacAAATCTagttcataaatttaaaacacgattcagaaacacacaaatccaatttgtaaattcaaaaaacaattcaaaaatacacatccaattcgtaaattcgaaaaacaattcaaaaagccatttaattcataaattcaaaaacaaaacaaaaaaaataatcaagtccaattcataaataaaaatacacaaaaaattcaaaaatacacatttaaattcaattcgtaaatttaaaaaattattcaaaaatccaattcataaattcaaatcaTGATTcagaaacacacaaatccaattagtaaattcaaaaaacgattcaaaaatacacaaatccaattcataaattaaaaaagaatcaaaaatacataaatcgaattcgtaaattcaaaaaacctaaaaaaaaaaacatccaattcgtatatttaaaaactatttaaaaatgcacaattcCAATtcgtaaaaaatatatttaaaaatagacaaatccgattcgtaaatataaaaaaaagattcacaaatacacaatttttattcataaattaaaaaaaaaaaaatacacaaatccaattcataaataaaaaaaaaagaaaacgattcaaaaatatacatctaattcgtaaattcaaaaaaattaactatttaaaaatacacaagtccatatcgtaaattcaaaacatgattcataaatacacaaatccaattaatttgACCTTTGGGGTTGTTAATGTCaatgtgctgtgcatgtatgaattttattttgtaactgTATTATTTATGAGAATGATCTGGCTCTACATGTAGGTGCCAGTTTTTACATTGTGTGAGGTTATTTCTTGCCCAAAAAGATCGAATGATTCAGCTGCCCTTTATTACAATGTCACAACCACcctgtatgcacacacacacacttacacacacacacacaaacctacaCCTACAATTTTAATGGTTTAGTAGATTTTGAACTTAGAGATGGATTCAGTTGTCACTTAGAAAagatgaagatgtttttttttataataataaattaatttcattacATTTCTTCTAATGCTTTTACTGTTGAATTTTGGCTCTATAAccatttgacagtttttttttttttgttatctgaTTACTTGAATAGGTTCTTTTCAAAACACAATGGGAGTTCTAGTGGTAACATTGATCTCCTTCATCTGAATCCTAAACACTTCGTTAAAAAAGagattggtgtgtgtgtttggctgttTCCAGGTGTGTTTTTGCCCGACAGTTCGTGTGTGCTAATAGTTCTACCTCAGCACTCTTGTGTTTTAGTAACTAATTCACTAAATTGACTGGCAGTGCTTTCTGTTGTTTCTGGAAAGACTAGTAGTTAACGGTTTtcagatgtatttatttatacagtatgtgttttttcatttttggttaatAAATCTATAGTACTTTTAAAAAATTCCCATTTTTGATTTCTGACTGCTGTAGAAGAAACGTTATGCTTGTGAGATCACAAGGTATTAAAGTATTTCGAGTTGAGATATTCTGGACCATATGGTGGTTCTTCACATGGGAGCAAAAATGTTCTGTTACTTTTTATACGTTTGCTTGTTTTATTCTATCAGGAAaggctttttgtttttaatgcattatttaggTTTCTTTTAAATTGACATTTCCCGATCAGCATTTTAAATGATTGTATGTTTCATGAGGGTCCGTTAATCCTGGAGCGAGTTAAAGTCAATGTTTTTTTACCTTTCAATTATGGCTCTTTTCAGTTCGAATGTTTTAGAAAGTGTAAACATTGAGACGTTTGTCATAGCAGTCAATTGATCTGGATTATTAGACTGCACTGCACTGAGGAGAGCAAAAGGGATATAAAAGAAGCTCATTTCCTGTTGTATCATCTCTTTTTCATGCTTTTTATGCTTTTCTTTGTATTCCAGTTTTGCCTGTAAATGCACTCGTCTATGCAACCTCTCCTTCTACACTGTGTGATGCTGCTCTGCTGAACTAGCCTCTAGCCTTTTAAGACCTtgatatttttgcttttttgtgcTTATGACTTTTTTTGTggactttttttgtgtgaaagtTGACACTTTCCTTTGTGTTAAGCACACTAGAGCTCTTGGAAGCTTCACTCATTTTTTTGGGTgtcatattttattgtgttttgttcaATAAACCCTGTAAAAGCGTAA
>TCONS_00062896
GGCGCGATGAACGCAAAGGACCGAGAGCGGCGCCGGACGCGCAAAGCTGGCAAACGAGCCGAAAGCGCGAGTGTCCTGCGCTCGCTCAGCGTCGACAACATTGACGAGGAGAATGAAACAATGGCAGGCGAGCTGGACATGGGCAAACATGGCAGCCTGGAGAGGCGGATCATTGCTCCGCGGTACAGCTTGCTCCGTGAAGTTGGCAGGGGCAGCTATGGCGTTGTGTACGAAGCCATTGCCCGTAAATCAGGTGCGAAAGTGGCAGTGAAAAAGCTGCGCTGTGACGCGCCCGAGAATGTGGAGCTGGCGCTGGCCGAGTTCTGGGCTCTGACCAGCCTGGAGAAGCGCCACGAGAACGTGGTGCAGCTGGAGGAGTGTGTGCTCCAAAAAAACGGGATGGCCCAGAAAATGAGCCATGGCAATAAGCGTTCAAAGCAGTATTTGAGGCTGGTGGAGACCTCGCTGAAAGGTGAGCGTGTGCTGTCGTGTCCTGATGAGCCCTGCTACCTGTGGTTTGTCATGGAGTTTTGTGAAGGAGGAGATCTGAATCAGTTCATCCTGTCCCGCCAGCCTGATCCCCACACCAACGCCAGCTTCATGATGCAATTGAGCAGCGCTGTGGCGTTCCTTCACCAAAACAACATTGTTCATAGAGACCTCAAACCAGATAACATCCTTATCTCGGAAAGTTCTGGAGCGCCTGTGTTGAAGGTGGCAGATTTCGGACTGAGCAAAGTGTGTGCTGGTCTGAGTGCCGGAGTACGGGATGCAGAAGAGGGACTTGACAAAAACAGGAACGGTGTTGTTAACATCAATAAGTTCTGGCTCTCGTCGGCATGCGGATCAGACTTTTACATGGCACCAGAGGTTTGGGAAGGACATTACACAGCCAAAGCGGACATTTTTGCTCTGGGTATTATCATCTGGGCCATGATCGAGAGAATCACTTTCATTGATGCCGAGTCCAAACGGGAACTACTTGGGACGTATGTGCGGCAGGGGTCTGACATCGTCCCGGTTGGGGAGGCACTCCTGGAGAACCCAAAGATGGTATTGAGTATTCCCCAGCGCAGGCGCTCGCACATGTCCGAGGCACTCCGAAAACTTTTAAAGGACATGCTGGCTGTCAATCCTCAGGACCGACCAGACGCTCTGGAGCTGCACAATAGGATGGGACAGGTCACTTGCGCGGCGTGA

Function

symbol description
stk35l Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in meiotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK35 (serine/threonine kinase 35).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0051321 meiotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041212-52 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in meiotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Orthologous to human STK35 (serine/threonine kinase 35).

Ensembl:

ensembl_id ENSDARG00000057497

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062894 False 770 processed_transcript 0.49 3 38845676 38858302
TCONS_00062895 False 4716 mRNA 0.37 3 38845697 38861349
TCONS_00062896 True 1200 mRNA 0.55 2 38845848 38850457

Neighbor

gene id symbol gene type direction distance location
XLOC_032190 ube3a coding upstream 55612 38773376 ~ 38790064 (+)
XLOC_032189 atp10a coding upstream 115146 38626684 ~ 38730530 (+)
XLOC_032188 CR628341.3 coding upstream 255504 38518219 ~ 38590172 (+)
XLOC_032187 gabrb3 coding upstream 332098 38381957 ~ 38513578 (+)
XLOC_032186 CR405707.1 coding upstream 468465 38377091 ~ 38377211 (+)
XLOC_032192 bin2b coding downstream 18612 38879961 ~ 38894366 (+)
XLOC_032193 slc48a1b coding downstream 34809 38896158 ~ 38902498 (+)
XLOC_032194 NA coding downstream 92132 38953481 ~ 38955126 (+)
XLOC_032195 prss60.1 coding downstream 224620 39085969 ~ 39091330 (+)
XLOC_032196 prss60.2 coding downstream 237048 39098397 ~ 39105480 (+)
XLOC_032185 NA non-coding upstream 485233 38358681 ~ 38360443 (+)
XLOC_032184 AL935047.1 non-coding upstream 758065 38087495 ~ 38087611 (+)
XLOC_032178 NA non-coding upstream 1369575 37470116 ~ 37476101 (+)
XLOC_032204 NA non-coding downstream 508986 39370335 ~ 39378734 (+)
XLOC_032208 NA non-coding downstream 671129 39532478 ~ 39541448 (+)
XLOC_032209 AL954698.2 non-coding downstream 804998 39666347 ~ 39667572 (+)
XLOC_032210 AL954698.1 non-coding downstream 838851 39700200 ~ 39717558 (+)

Expression


Co-expression Network