G1325181


Basic Information

Item Value
gene id G1325181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 73394160 ~ 73395588 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1513143
ATACAATTGTGTCAACTTACAGTATGAATTTAATTAAACCGCTGGATGTTTTGGCACAAAGGCTTCGCAGAAGAAAAACAAACGGAAAAAAAGTTGAGTGGAAAAAAAGTGAGAAGAAATTTGATAATGAATTTTTCTGCCCTGGTGCAGTTCAAACTACTACAGCTGATTCCCAAGAAGAAACAAAACCAGAGTTTGGCCGGTTTATTGTTTTAAATAATGTTCAGACATGTTTAGACAGATGTCCTAaattccatcccaaatggcaccctattccctatgtagtgcactgaagtgccatagggttctggtcaaaaaaGTAGTCCACAGTAAaggatatagggtgccatttgggattgatACTTGGTCTGTGATGCTGATAGTCAGAGGTGTTTTAATGTGAATAGTTTCATAGTTGAGAAAAGGAAAGGGCTGTCTTAGTAACGGGCTCTCACACTGTAAACTGTTGGTTTGATCTGGTCTCAAACAGGGTTGACTCATGCcctactgatctctctctctctctctctctctctctctctctctctctctgtggtttaACCAGCTGTAACAGTTCAGAAGTTATTCTTTCTGGACTTCACTAAGGGTTTTTTCAGTTGTTCGGGGACACAAAAAAAAATTATTGAGTcaagccgaagtctacgccccttcgtcagTGATTCTTCAATAGGGATTCTTCAGTAGTGATTCTtcagtagggattcttcagtaGTGATTCTtcagtagggattcttcagtaGTGATTCTTCAGTAGGGATTCTTCAGTAGTGATTCTTCAGTAGTGATTCTTCAGTAGGGATCCTTCAGTAGTGATTCTtcagtagggattcttcagtaGTGATTCTtcagtagggattcttcagtaGGGATTCTtcagtagggattcttcagtaGTGATTCTTCAGTAGTGATTCTTCAGTAGGGATTATACACTCTTCAGTAGGGATTATACACTCTTCAGTAGGGATTATTCAGTAATGATTCTTCAGTAGTGATTCTTCAATAGGGATTATACACTCTTCAATAGGGATTATTCAGTAGTGATTCTTCAGTAGGGATTATACACTCTTCAGTAGGGATTATACACTCTTCAGTAGGGATTATACACTCTTCAGTAGGGATTATACAATCTTCAGTAGGGATTATACACTCTTCAGTAGGGATTATTCAGTAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1513143 True 1198 lncRNA 0.39 4 73394160 73395588

Neighbor

gene id symbol gene type direction distance location
LOC118938934 LOC106594503 coding downstream 55799 73337025 ~ 73338361 (-)
LOC110490803 LOC106591178 coding downstream 251190 72959216 ~ 73142970 (-)
LOC110490677 LOC106576365 coding downstream 477913 72855022 ~ 72916247 (-)
LOC118938848 NA coding downstream 479325 72910104 ~ 72914835 (-)
LOC110499730 LOC106609820 coding downstream 656722 72735016 ~ 72737438 (-)
mgst1.1 LOC106590880 coding upstream 488695 73884283 ~ 73902168 (-)
LOC118938851 LOC106575061 coding upstream 495330 73890918 ~ 73902131 (-)
LOC118938901 NA coding upstream 524865 73920453 ~ 73929800 (-)
LOC110527628 dera coding upstream 579346 73972321 ~ 73985501 (-)
LOC110513406 LOC106576618 coding upstream 771610 74167198 ~ 74213128 (-)
G1325146 NA non-coding downstream 81199 73312452 ~ 73312961 (-)
G1325138 NA non-coding downstream 91509 73300044 ~ 73302651 (-)
G1325132 NA non-coding downstream 109445 73284056 ~ 73284715 (-)
G1324994 NA non-coding downstream 135863 73258013 ~ 73258297 (-)
G1324988 NA non-coding downstream 139411 73252461 ~ 73254749 (-)
G1325186 NA non-coding upstream 7665 73403253 ~ 73405296 (-)
G1325197 NA non-coding upstream 32287 73427875 ~ 73428425 (-)
G1325199 NA non-coding upstream 36851 73432439 ~ 73433812 (-)
G1325227 NA non-coding upstream 128354 73523942 ~ 73524341 (-)
G1325233 NA non-coding upstream 142888 73538476 ~ 73538955 (-)
G1324805 NA other downstream 487809 72905449 ~ 72906351 (-)
LOC110531910 gsap other downstream 861145 72500414 ~ 72533138 (-)
LOC110531900 LOC106576463 other downstream 910732 72481939 ~ 72493287 (-)
G1324604 NA other downstream 912991 72480405 ~ 72481169 (-)
G1324569 NA other downstream 986391 72407421 ~ 72407769 (-)
G1325752 NA other upstream 279750 73675338 ~ 73677653 (-)
G1325780 NA other upstream 339093 73734681 ~ 73735097 (-)
G1325863 LOC106584099 other upstream 606859 74002447 ~ 74002749 (-)
LOC110511321 lemd3 other upstream 829828 74218902 ~ 74256009 (-)

Expression


Co-expression Network