Gene
RNA
| Item | Value |
|---|---|
| gene id | G1325233 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 73538476 ~ 73538955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ETS-related transcription factor Elf-2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1513201 | True | 426 | lncRNA | 0.42 | 2 | 73538476 | 73538955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938934 | LOC106594503 | coding | downstream | 200115 | 73337025 ~ 73338361 (-) |
| LOC110490803 | LOC106591178 | coding | downstream | 395506 | 72959216 ~ 73142970 (-) |
| LOC110490677 | LOC106576365 | coding | downstream | 622229 | 72855022 ~ 72916247 (-) |
| LOC118938848 | NA | coding | downstream | 623641 | 72910104 ~ 72914835 (-) |
| LOC110499730 | LOC106609820 | coding | downstream | 801038 | 72735016 ~ 72737438 (-) |
| mgst1.1 | LOC106590880 | coding | upstream | 345328 | 73884283 ~ 73902168 (-) |
| LOC118938851 | LOC106575061 | coding | upstream | 351963 | 73890918 ~ 73902131 (-) |
| LOC118938901 | NA | coding | upstream | 381498 | 73920453 ~ 73929800 (-) |
| LOC110527628 | dera | coding | upstream | 435979 | 73972321 ~ 73985501 (-) |
| LOC110513406 | LOC106576618 | coding | upstream | 628243 | 74167198 ~ 74213128 (-) |
| G1325227 | NA | non-coding | downstream | 14135 | 73523942 ~ 73524341 (-) |
| G1325199 | NA | non-coding | downstream | 104664 | 73432439 ~ 73433812 (-) |
| G1325197 | NA | non-coding | downstream | 110051 | 73427875 ~ 73428425 (-) |
| G1325186 | NA | non-coding | downstream | 133180 | 73403253 ~ 73405296 (-) |
| G1325181 | NA | non-coding | downstream | 142888 | 73394160 ~ 73395588 (-) |
| G1325235 | NA | non-coding | upstream | 1647 | 73540602 ~ 73541823 (-) |
| G1325237 | NA | non-coding | upstream | 4834 | 73543789 ~ 73544013 (-) |
| G1325246 | NA | non-coding | upstream | 21932 | 73560887 ~ 73561247 (-) |
| G1325247 | NA | non-coding | upstream | 23096 | 73562051 ~ 73562265 (-) |
| G1325248 | NA | non-coding | upstream | 23895 | 73562850 ~ 73563315 (-) |
| G1324805 | NA | other | downstream | 632125 | 72905449 ~ 72906351 (-) |
| LOC110531910 | gsap | other | downstream | 1005461 | 72500414 ~ 72533138 (-) |
| LOC110531900 | LOC106576463 | other | downstream | 1055048 | 72481939 ~ 72493287 (-) |
| G1324604 | NA | other | downstream | 1057307 | 72480405 ~ 72481169 (-) |
| G1324569 | NA | other | downstream | 1130707 | 72407421 ~ 72407769 (-) |
| G1325752 | NA | other | upstream | 136383 | 73675338 ~ 73677653 (-) |
| G1325780 | NA | other | upstream | 195726 | 73734681 ~ 73735097 (-) |
| G1325863 | LOC106584099 | other | upstream | 463492 | 74002447 ~ 74002749 (-) |
| LOC110511321 | lemd3 | other | upstream | 686461 | 74218902 ~ 74256009 (-) |
