XLOC_032196 (prss60.2)


Basic Information

Item Value
gene id XLOC_032196
gene name prss60.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39098397 ~ 39105480 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062904
TTGACAAGCACAACTGTATAAATGGGATTGTAGAAGATACAGAGGTTGAGAGACTGCCACTAGTAGACATTCTGCTAGCAAACAGAGGGACTGTGTGAAGATGTGGAGATTGACTTGTGCCACTTTGACCCTACTCATATGTGTTAAAGGTTCACTTTCTCAGTTGAATGTTTGTGGACAAGCCCCTCTGAACTCCCGTATTGTAGGGGGTGTAAATGCACCTGAGGGATCATGGCCTTGGCAGGTTAGTCTACAGAGCCCTAGGTATGGTGGTCATTTTTGCGGAGGCTCCCTGATCAGCAGTGAATGGGTGCTGACAGCTGCTCACTGTTTACCTGGTGTCTCTGAATCCAGTCTTGTTGTGTACTTGGGAAGGAGAACACAGCAGGGAGTCAACACTCATGAAACTAGTAGAAATGTTGCAAAAATAATCGTTCACTCCTCCTACAACAGCAACACAAATGACAATGACATCGCTCTGCTGCGCCTGTCTTCTGCTGTTACCTTCAATGACTATATCAGACCTGTATGTCTGGCGGCCCAGAACAGTGTCTATAGTGCTGGCACCAGCAGCTGGATCACAGGCTGGGGAGATGTTCAGGCTGGAGTGAATCTACCTGCTCCTGGGATTCTGCAGGAGACTATGATTCCAGTTGTGGCCAATGATCGATGTAATGCTCAACTGGGTTCTGGAACTGTCACCAACAACATGATCTGTGCTGGTTTAGCAAAGGGAGGCAAAGACACCTGCCAGGGGGATTCTGGTGGTCCAATGGTGACTCGGCTGTGTACAGTGTGGATTCAGGCTGGTATCACCAGCTGGGGTTATGGCTGTGCTGACCCCAACAGTCCTGGGGTTTACACTCGTGTGTCACAGTATCAGAGTTGGATTTCAAGCAAAATCAGTCAGAACCAACCAGGATTCATTCTCTTCACCCCACCAAGTTCATGCACCTCCAGCAGCCTAACCTCATCTTCCTGTAGCGGGAGATGCAATGAGGTGTACAACACACTCAATCGCTGCAACTGCAATGCCAACTGTGCTACAAAATGCTGCATGGATTACAAACAGCGTTGTGCCAGTTAAGATACCTCCACGGATTCAAAACAGCCTCGTAATCGTATCACTTGTGAATAAGACTTTTACCTGCCTGTTTGTCCAGAAGACTTCAGTGCTGCTTTTAAAATGTTGCACAGTCAGAATTTCAGTGGATACAGCCTTTCAAAGAGCTGCTTCACTCACTTCACTCAGGGGTGTACATTCATATTTCTTTATGTTTGAAATAATTTGAACACTTTCCCCTCTCTATTAGTTGAGAGTGATTTCTCTCTCTTGATCTTTTCaacgtttattttttaaattagtattcTGGGTATATTAAAAtgatactttaaatattttttttttacaaatttctttCACAATACATTTCCGCTGCCAAATGAGTGGCCATTTctccaaatttaaataaatgtcacaATTCTGTGCCATAAGTAATGATTTAATAatggctttgacacaatcattAAATAACCCCAAACACCCTGTCTTTTCATGCTTTTTGCAGAAATAAATTTTTCCAACAGTGG
>TCONS_00062905
AGCAAACAGAGGGACTGTGTGAAGATGTGGAGATTGACTTGTGCCACTTTGACCCTACTCATATGTGTTAAAGGTTCACTTTCTCAGTTGAATGTTTGTGGACAAGCCCCTCTGAACTCCCGTATTGTAGGGGGTGTAAATGCACCTGAGGGATCATGGCCTTGGCAGGTTAGTCTACAGAGCCCTAGGTATGGTGGTCATTTTTGCGGAGGCTCCCTGATCAGCAGTGAATGGGTGCTGACAGCTGCTCACTGTTTACCTGGTGTCTCTGAATCCAGTCTTGTTGTGTACTTGGGAAGGAGAACACAGCAGGGAGTCAACACTCATGAAACTAGTAGAAATGTTGCAAAAATAATCGTTCACTCCTCCTACAACAGCAACACAAATGACAATGACATCGCTCTGCTGCGCCTGTCTTCTGCTGTTACCTTCAATGACTATATCAGACCTGTATGTCTGGCGGCCCAGAACAGTGTCTATAGTGCTGGCACCAGCAGCTGGATCACAGGCTGGGGAGATGTTCAGGCTGGAGTGAATCTACCTGCTCCTGGGATTCTGCAGGAGACTATGATTCCAGTTGTGGCCAATGATCGATGTAATGCTCAACTGGGTTCTGGAACTGTCACCAACAACATGATCTGTGCTGGTTTAGCAAAGGGAGGCAAAGACACCTGCCAGGGGGATTCTGGTGGTCCAATGGTGACTCGGCTGTGTACAGTGTGGATTCAGGCTGGTATCACCAGCTGGGGTTATGGCTGTGCTGACCCCAACAGTCCTGGGGTTTACACTCGTGTGTCACAGTATCAGAGTTGGATTTCAAGCAAAATCAGTCAGAACCAACCAGGATTCATTCTCTTCACCCCACCAAGTTCATGCACCTCCAGCAGCCTAACCTCATCTTCCTGTAGCGGGAGATGCAATGAGGTGTACAACACACTCAATCGCTGCAACTGCAATGCCAACTGTGCTACAAAATGCTGCATGGATTACAAACAGCGTTGTGCCAGTAAG

Function

symbol description
prss60.2 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in EVL; neuromast; olfactory placode; and peripheral olfactory organ.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005575 cellular_component cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050320-109 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in EVL; neuromast; olfactory placode; and peripheral olfactory organ.

Ensembl:

ensembl_id ENSDARG00000055644

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062904 False 1590 mRNA 0.44 8 39098397 39105480
TCONS_00062905 True 1011 mRNA 0.49 7 39098473 39104152

Neighbor

gene id symbol gene type direction distance location
XLOC_032195 prss60.1 coding upstream 7067 39085969 ~ 39091330 (+)
XLOC_032194 NA coding upstream 143271 38953481 ~ 38955126 (+)
XLOC_032193 slc48a1b coding upstream 195899 38896158 ~ 38902498 (+)
XLOC_032192 bin2b coding upstream 204031 38879961 ~ 38894366 (+)
XLOC_032191 stk35l coding upstream 237048 38845676 ~ 38861349 (+)
XLOC_032197 prss60.3 coding downstream 3378 39108858 ~ 39112234 (+)
XLOC_032198 gpr84 coding downstream 8865 39114345 ~ 39119142 (+)
XLOC_032199 tac3b coding downstream 78756 39184236 ~ 39187657 (+)
XLOC_032200 b4galnt1b coding downstream 117118 39222598 ~ 39252851 (+)
XLOC_032201 ankrd33ab coding downstream 173624 39279104 ~ 39286029 (+)
XLOC_032188 CR628341.3 non-coding upstream 508225 38518219 ~ 38590172 (+)
XLOC_032186 CR405707.1 non-coding upstream 721186 38377091 ~ 38377211 (+)
XLOC_032185 NA non-coding upstream 737954 38358681 ~ 38360443 (+)
XLOC_032184 AL935047.1 non-coding upstream 1010786 38087495 ~ 38087611 (+)
XLOC_032204 NA non-coding downstream 264855 39370335 ~ 39378734 (+)
XLOC_032208 NA non-coding downstream 426998 39532478 ~ 39541448 (+)
XLOC_032209 AL954698.2 non-coding downstream 560867 39666347 ~ 39667572 (+)
XLOC_032210 AL954698.1 non-coding downstream 594720 39700200 ~ 39717558 (+)
XLOC_032213 NA non-coding downstream 769044 39874524 ~ 39882227 (+)

Expression


Co-expression Network