G1325820


Basic Information

Item Value
gene id G1325820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 73876382 ~ 73876887 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1514046
acatatagacCTGTTGTAAATTACATTATGACTGAACATGATGAAATATAAACATATAGACCTGTTGTAAATTACACTATGACTGAACATGGACACGCCAAATGTTGTCAATCAGCTAGATtaaattcacaaaaaaaaaaagagagtgaaTAATTGTAATtaaattcaaaacaaaacaacaacaacaacttgttgtaaacagtctgaatacacGGTAATTGCTTCCCGTTGGCGTATAATATTACAACAGACAGACAATGGAGGGTTTTACGCACATCTGAGGTTTTCACAGTCACCGGACAAAGATCCAATGTAAAGGACAAAGATCCAATGTAAAGGACAAAGATCCAATGTAAAGGACAAAGATCCAATGTAAAGGACAAAGATTCAATATAAAGGACAAAGATCCAATGTAAAGGACAAAGATCCcataaaaagagaaagagagaatgtccACTTACCTTAATATAATGTTTTATAGCTGTATTGGAAGCATCTTACagatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1514046 True 506 lncRNA 0.33 1 73876382 73876887

Neighbor

gene id symbol gene type direction distance location
LOC118938934 LOC106594503 coding downstream 538021 73337025 ~ 73338361 (-)
LOC110490803 LOC106591178 coding downstream 733412 72959216 ~ 73142970 (-)
LOC110490677 LOC106576365 coding downstream 960135 72855022 ~ 72916247 (-)
LOC118938848 NA coding downstream 961547 72910104 ~ 72914835 (-)
LOC110499730 LOC106609820 coding downstream 1138944 72735016 ~ 72737438 (-)
mgst1.1 LOC106590880 coding upstream 7396 73884283 ~ 73902168 (-)
LOC118938851 LOC106575061 coding upstream 14031 73890918 ~ 73902131 (-)
LOC118938901 NA coding upstream 43566 73920453 ~ 73929800 (-)
LOC110527628 dera coding upstream 98047 73972321 ~ 73985501 (-)
LOC110513406 LOC106576618 coding upstream 290311 74167198 ~ 74213128 (-)
G1325818 NA non-coding downstream 10399 73859229 ~ 73865983 (-)
G1325812 NA non-coding downstream 69673 73805543 ~ 73806709 (-)
G1325810 NA non-coding downstream 71766 73804030 ~ 73804616 (-)
G1325811 NA non-coding downstream 72431 73803159 ~ 73803951 (-)
G1325805 NA non-coding downstream 82094 73794086 ~ 73794288 (-)
G1325821 NA non-coding upstream 1553 73878440 ~ 73878713 (-)
G1325825 NA non-coding upstream 29222 73906109 ~ 73908019 (-)
G1325849 NA non-coding upstream 70698 73947585 ~ 73947824 (-)
G1325852 NA non-coding upstream 75156 73952043 ~ 73952248 (-)
G1325853 NA non-coding upstream 78501 73955388 ~ 73955870 (-)
G1325780 NA other downstream 141285 73734681 ~ 73735097 (-)
G1325752 NA other downstream 198729 73675338 ~ 73677653 (-)
G1324805 NA other downstream 970031 72905449 ~ 72906351 (-)
LOC110531910 gsap other downstream 1343367 72500414 ~ 72533138 (-)
LOC110531900 LOC106576463 other downstream 1392954 72481939 ~ 72493287 (-)
G1325863 LOC106584099 other upstream 125560 74002447 ~ 74002749 (-)
LOC110511321 lemd3 other upstream 348529 74218902 ~ 74256009 (-)
G1325915 b2m other upstream 498414 74375301 ~ 74395568 (-)
LOC118938855 LOC106576675 other upstream 728484 74602942 ~ 74607316 (-)

Expression


Co-expression Network