Item | Value |
---|---|
gene id | G1325317 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 73880434 ~ 73919702 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1513328 | False | 302 | lncRNA | 0.57 | 3 | 73880434 | 73892456 |
TU1513325 | False | 2193 | lncRNA | 0.44 | 3 | 73881551 | 73892456 |
TU1513313 | False | 1529 | lncRNA | 0.41 | 3 | 73882997 | 73892456 |
TU1513314 | False | 1482 | lncRNA | 0.41 | 4 | 73882997 | 73892456 |
TU1513315 | False | 1430 | lncRNA | 0.41 | 3 | 73882997 | 73892456 |
TU1513316 | False | 1193 | lncRNA | 0.42 | 3 | 73882997 | 73892456 |
TU1513317 | False | 1352 | lncRNA | 0.42 | 4 | 73882997 | 73892456 |
TU1513318 | False | 1349 | lncRNA | 0.41 | 3 | 73882997 | 73892456 |
TU1513319 | False | 1277 | lncRNA | 0.38 | 4 | 73882997 | 73919702 |
TU1513320 | False | 747 | lncRNA | 0.47 | 3 | 73882997 | 73892456 |
TU1513322 | False | 1260 | lncRNA | 0.38 | 4 | 73882997 | 73919702 |
TU1513323 | False | 1005 | lncRNA | 0.39 | 4 | 73882997 | 73919702 |
TU1513324 | False | 714 | lncRNA | 0.40 | 4 | 73882997 | 73919702 |
TU1513326 | False | 721 | lncRNA | 0.40 | 3 | 73882997 | 73919702 |
TU1513327 | False | 1148 | lncRNA | 0.43 | 4 | 73882997 | 73892456 |
TU1513329 | False | 864 | lncRNA | 0.45 | 4 | 73882997 | 73892456 |
TU1513332 | False | 831 | lncRNA | 0.39 | 4 | 73882997 | 73919702 |
TU1513333 | False | 747 | lncRNA | 0.47 | 3 | 73882997 | 73892456 |
TU1513334 | False | 1074 | lncRNA | 0.39 | 3 | 73882997 | 73919702 |
TU1513321 | False | 1387 | lncRNA | 0.40 | 2 | 73890918 | 73892456 |
TU1513331 | True | 825 | lncRNA | 0.37 | 2 | 73890918 | 73891894 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118936425 | lmo3 | coding | upstream | 77090 | 73677084 ~ 73803344 (+) |
LOC118938850 | NA | coding | upstream | 185139 | 73694833 ~ 73698637 (+) |
LOC110517131 | LOC105024897 | coding | upstream | 343486 | 73258523 ~ 73536948 (+) |
LOC118938849 | LOC106609835 | coding | upstream | 626527 | 73172193 ~ 73254659 (+) |
LOC110490361 | LOC106609821 | coding | upstream | 1030259 | 72742193 ~ 72850175 (+) |
LOC118938852 | NA | coding | downstream | 107388 | 74027090 ~ 74132032 (+) |
LOC118938853 | NA | coding | downstream | 214518 | 74134220 ~ 74140504 (+) |
LOC118938854 | NA | coding | downstream | 273379 | 74193081 ~ 74199908 (+) |
LOC118936538 | wif1 | coding | downstream | 337833 | 74257535 ~ 74325622 (+) |
LOC110513649 | NA | coding | downstream | 428339 | 74348041 ~ 74352684 (+) |
G1325336 | NA | non-coding | upstream | 27183 | 73852949 ~ 73853251 (+) |
G1325335 | NA | non-coding | upstream | 28128 | 73852038 ~ 73852306 (+) |
G1325334 | NA | non-coding | upstream | 28954 | 73851018 ~ 73851480 (+) |
G1325327 | NA | non-coding | upstream | 54021 | 73826181 ~ 73826413 (+) |
G1325302 | NA | non-coding | upstream | 73696 | 73805533 ~ 73806738 (+) |
G1325366 | NA | non-coding | downstream | 24887 | 73944589 ~ 73945386 (+) |
G1325367 | NA | non-coding | downstream | 25749 | 73945451 ~ 73945674 (+) |
G1325370 | NA | non-coding | downstream | 32250 | 73951952 ~ 73952251 (+) |
G1325372 | NA | non-coding | downstream | 36910 | 73956612 ~ 73957043 (+) |
G1325374 | NA | non-coding | downstream | 43120 | 73962822 ~ 73963141 (+) |
G1325337 | NA | other | upstream | 23760 | 73856344 ~ 73856674 (+) |
G1324240 | NA | other | upstream | 974345 | 72905710 ~ 72906089 (+) |
G1324195 | NA | other | upstream | 1014625 | 72860820 ~ 72865809 (+) |
G1324156 | LOC106576365 | other | upstream | 1024412 | 72853566 ~ 72856022 (+) |
G1325481 | NA | other | downstream | 318637 | 74238339 ~ 74240169 (+) |
LOC110517153 | cpm | other | downstream | 808097 | 74657149 ~ 74743482 (+) |
G1326191 | NA | other | downstream | 1193987 | 75113689 ~ 75114514 (+) |
G1326467 | NA | other | downstream | 1603167 | 75522869 ~ 75527017 (+) |