XLOC_032199 (tac3b)


Basic Information

Item Value
gene id XLOC_032199
gene name tac3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39184236 ~ 39187657 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062909
CTGAACAGCATCCTGTTAACACCAGCTCATACTAGTATTTGGATAAGGTGTGCGAGGATGTCCTGCGGCTGGCTGCTCGCGCTGCTCGTCCACGTGCTGCTGCTGCTCGCGTGCCCGAGACTCTCGCGGAGCGCCCTCGACTACTCCTTCACTGACAACAGCGACGCCCAGCCGGAGCGCTACGACAAACGATATGATGATATTGATTACGACAGTTTCGTCGGCCTGATGGGCAGGAGGAGCACAGGAATAAATCGTGAGGCACATTTGCCATTTAGACCGAATATGAATGACATCTTTGTCGGACTGTTAGGACGGAGAAACACTTTGTCGTCTATGAGAAAAGAAAGGAGAGGGAACATTTTCTTCAAGGATGGAAGACTGAGgTTTTGCTGTGGTGTATGAAGCTTTCTCTACGAACTAAtccaacatcacacacacacacacacacacatgcgcgcgcacactcacacacactccacaTTTCATCCATTTTAGTATTCTTTTGGCTAACCTTTGGTACAGATTTAACCAAACTTGTGtcaaataaatctttttaaatagttTCTTAAGTAATAACAGTCCTGTTGTATTCAGATGAATGAAGATTAAAGCATGTTGGCCATAATTTGTGCAATATTGTGCTTGTaacttttcaatttaaaaacattcatatttaaaatgctgtaaaatatttgattttattcATCGATAATACgacagtttactgtaaaataagtctttatttTAAGATGCTGGTTATCATTCCTCAGTAACACACTTTTCCTCACACACTCTTTTATAAATAAAAGATTGCTGTGGATTTACTG

Function

symbol description
tac3b Predicted to be involved in positive regulation of blood pressure. Predicted to act upstream of or within neuropeptide signaling pathway and tachykinin receptor signaling pathway. Predicted to be located in extracellular region. Is expressed in several structures, including adipose tissue; brain; liver; pleuroperitoneal region; and retina. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 10 with or without anosmia. Orthologous to human TAC3 (tachykinin precursor 3).

GO:

id name namespace
GO:0007217 tachykinin receptor signaling pathway biological_process
GO:0045777 positive regulation of blood pressure biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-120716-1 Predicted to be involved in positive regulation of blood pressure. Predicted to act upstream of or within neuropeptide signaling pathway and tachykinin receptor signaling pathway. Predicted to be located in extracellular region. Is expressed in several structures, including adipose tissue; brain; liver; pleuroperitoneal region; and retina. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 10 with or without anosmia. Orthologous to human TAC3 (tachykinin precursor 3).

Ensembl:

ensembl_id ENSDARG00000097596

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062909 True 830 mRNA 0.41 7 39184236 39187657

Neighbor

gene id symbol gene type direction distance location
XLOC_032198 gpr84 coding upstream 65094 39114345 ~ 39119142 (+)
XLOC_032197 prss60.3 coding upstream 72002 39108858 ~ 39112234 (+)
XLOC_032196 prss60.2 coding upstream 78756 39098397 ~ 39105480 (+)
XLOC_032195 prss60.1 coding upstream 92906 39085969 ~ 39091330 (+)
XLOC_032194 NA coding upstream 229110 38953481 ~ 38955126 (+)
XLOC_032200 b4galnt1b coding downstream 34941 39222598 ~ 39252851 (+)
XLOC_032201 ankrd33ab coding downstream 91447 39279104 ~ 39286029 (+)
XLOC_032202 si:dkey-195m11.11 coding downstream 103120 39290777 ~ 39306721 (+)
XLOC_032203 krt18b coding downstream 172720 39360377 ~ 39365467 (+)
XLOC_032204 NA coding downstream 182678 39370335 ~ 39378734 (+)
XLOC_032188 CR628341.3 non-coding upstream 594064 38518219 ~ 38590172 (+)
XLOC_032186 CR405707.1 non-coding upstream 807025 38377091 ~ 38377211 (+)
XLOC_032185 NA non-coding upstream 823793 38358681 ~ 38360443 (+)
XLOC_032184 AL935047.1 non-coding upstream 1096625 38087495 ~ 38087611 (+)
XLOC_032208 NA non-coding downstream 344821 39532478 ~ 39541448 (+)
XLOC_032209 AL954698.2 non-coding downstream 478690 39666347 ~ 39667572 (+)
XLOC_032210 AL954698.1 non-coding downstream 512543 39700200 ~ 39717558 (+)
XLOC_032213 NA non-coding downstream 686867 39874524 ~ 39882227 (+)

Expression


Co-expression Network