XLOC_032201 (ankrd33ab)


Basic Information

Item Value
gene id XLOC_032201
gene name ankrd33ab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39279104 ~ 39286029 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062912
TCAAAGACCATTGTAAGAGTGAGTGTGTCTGTATGTGAAAGGTGATTATGCAGCGAATGTCTACATTGGATCCTTTCTGATCCTGAAAGGCATTAGTCGGTCTAATGACCTGAGGTGTACTGACAGAGCATGCATACGCCCATCTATGATCACATACTACACACACACTAGGTAGACGTGATGCTGATGGCTGTGTTTTCTGGAAGCTGATCTGAATTTTCTGATAATAGCGCTGTAAAAGTTGATACCAGGATACACTCTTCTTCTGAAATGTGGACATAGGGGTCATAAACACTTGGAGTGCATTCCTTCACCTCGGGTTTCTGACCTGCTGCAACCATGTTGAGACACTTTCCTCAGATGCCAGCAAAGATGCTGTAGACAAGATTGATCTGTTAAGGGATGGCAGCAGTTCAGAGCTCTGGCTTTGAGGACCCCCACCTGGGGTCATGCCCAGATGGAGATGAAATCTCACTTTTGGATGAAGACACAGACTCTGGAAGTTTGCTGTCTGAAGATTCCGTGCTCCCTGAGTATGAACTAGAGGATGGGAAAAAGGGAACTGCCAACACACTGTATGAGGCTTGTGTCCAGAATGACCCAGAAGCGCTGAAGAGGATTTTGGAACGTGGTGTGACCTGTGATGAGGTCATGGAAGTTGACATTAATGGATGGAATGGACTGATGGTGGCTGCATATAAAGGCTTTCTTCAAATAGTGTATGAGCTGCATGGGTGCCCACATTTGAACATTAACCACCAAGACAATGACGGCAACACCGCCCTTATGATCGCCGCTCAAGCTGGTCATGTCTCCATATGTAACTACATCATGAATTACTTCCCTGGAGCAGACACAGAGATCAGAGATAACAGAGGATTCACTGCCCTCATTAAAGCTGCCATACAGGGCAGGAATGATGTGGTGGCTGCTCTTATAATGCACGGTGCTGATGTAAATGCTGTAGACTCCAATCGTGGTAAATGTGCACGTGACTGGGCGCTGAAGACGGGCCGCTTTGACACGCTGAAACGACTGCGCCACCTTGCGCTCCATCCCACAGCGGAGCAGTTCTGTGATACCTACGTTCCCGAGTGGCCCAACCTCAAGGTGCTGGTCAGCAAAGCAACAGCCAACAGGAGTGCAGGTCAGAAGTTGACACATCATTTGAAGAATAGGTTCGGTTTCAGCTTCCCACGTGACCCAGTGGAAAACGGTGTCATGGATCACATGGTGCGAATGACCACCAGTCTGCATAGCCCACTCATAGCTACAGCTACACGACCACTGTGCCCGAGCAGCCCTCCACAGATGGGTAAACGGCGGCTGGCTGTGGCTGAGCTGATGCAAAAGCACTCTGAGAAACTGCTGGAGGAGAGTTCACTGTGCCACCGAAACAGCTCCATCTCCTCTGTGTCTCCATCTTTCCATTCAGCCGAGTTTGTGTCTATGACCTGCTGTCCCGATACTGAGAGACGGGGCAGTGTGCTGTCCATTGGTATGCGCACATTCATTCCTCGTAGCGTAGCATCAAGGCGCAATAGCATTTTCCCCTCCGGCTGCATCCCACAGATCAAAGTCACCAAATCCTCCGAGCCAACTCcgaagaaagaaaagaagaacaaaaaagaTAAGGGCTACCTGGAGCCTCCAAAGTGGAAGTATAAGGAGGCCAAGGAAGAgaagaagaaagagaaaaaagcCTTGAAGGAAAAGGAAAAGGAGGAGAAGGACAAAGAGAAAAAAAGCAAAGACaaggagaaaagaaaaaagaataaatacactgaCTGAAAGTGATGCACTTTGGTTACAATGTCTTCCCTTTATTCATATcgaagtccctttaaggcaagtcatttcactcagtggccatctttgaaatgcctacAGTTTATAGTTGGAATCaacattaaaatttaataacAGACTCGTAAGATAATATAGATTTCTTGACCTCATTATTTCCTCATGGAGGTAAATATGTAAGATGAATTAGAATCAGTCTAAATTTAATGATCACTTAAAATTGTATTTCATTTATAAAATGGAACCTTACAGTCTCTTAAGGACTTTCGGTTTATAAAAGTTtgaatcatacacacacacacacacacacacacacacacacacacaca
>TCONS_00062913
GAAACGTTTGTGTCCTTGAACAGTTATAGTTTCAATTGGTACCAGTGTATTTTTCTTAAATCTTCAATTGCTTGATCAGAGTCTTGAGGTTTATTTCTGTTGGTCTGTTTACTTCTAAACAGGGGTCATAAACACTTGGAGTGCATTCCTTCACCTCGGGTTTCTGACCTGCTGCAACCATGTTGAGACACTTTCCTCAGATGCCAGCAAAGATGCTGTAGACAAGATTGATCTGTTAAGGGATGGCAGCAGTTCAGAGCTCTGGCTTTGAGGACCCCCACCTGGGGTCATGCCCAGATGGAGATGAAATCTCACTTTTGGATGAAGACACAGACTCTGGAAGTTTGCTGTCTGAAGATTCCGTGCTCCCTGAGTATGAACTAGAGGATGGGAAAAAGGGAACTGCCAACACACTGTATGAGGCTTGTGTCCAGAATGACCCAGAAGCGCTGAAGAGGATTTTGGAACGTGGTGTGACCTGTGATGAGGTCATGGAAGTTGACATTAATGGATGGAATGGACTGATGGTGGCTGCATATAAAGGCTTTCTTCAAATAGTGTATGAGCTGCATGGGTGCCCACATTTGAACATTAACCACCAAGACAATGACGGCAACACCGCCCTTATGATCGCCGCTCAAGCTGGTCATGTCTCCATATGTAACTACATCATGAATTACTTCCCTGGAGCAGACACAGAGATCAGAGATAACAGAGGATTCACTGCCCTCATTAAAGCTGCCATACAGGGCAGGAATGATGTGGTGGCTGCTCTTATAATGCACGGTGCTGATGTAAATGCTGTAGACTCCAATCGTGGTAAATGTGCACGTGACTGGGCGCTGAAGACGGGCCGCTTTGACACGCTGAAACGACTGCGCCACCTT

Function

symbol description
ankrd33ab Acts upstream of or within camera-type eye development. Orthologous to human ANKRD33 (ankyrin repeat domain 33).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-100729-1 Acts upstream of or within camera-type eye development. Orthologous to human ANKRD33 (ankyrin repeat domain 33).

Ensembl:

ensembl_id ENSDARG00000002508

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062912 False 2135 mRNA 0.46 5 39279104 39286029
TCONS_00062913 True 887 mRNA 0.47 4 39279831 39284941

Neighbor

gene id symbol gene type direction distance location
XLOC_032200 b4galnt1b coding upstream 26253 39222598 ~ 39252851 (+)
XLOC_032199 tac3b coding upstream 91447 39184236 ~ 39187657 (+)
XLOC_032198 gpr84 coding upstream 159962 39114345 ~ 39119142 (+)
XLOC_032197 prss60.3 coding upstream 166870 39108858 ~ 39112234 (+)
XLOC_032196 prss60.2 coding upstream 173624 39098397 ~ 39105480 (+)
XLOC_032202 si:dkey-195m11.11 coding downstream 4748 39290777 ~ 39306721 (+)
XLOC_032203 krt18b coding downstream 74348 39360377 ~ 39365467 (+)
XLOC_032204 NA coding downstream 84306 39370335 ~ 39378734 (+)
XLOC_032205 mettl7a coding downstream 207835 39493864 ~ 39497974 (+)
XLOC_032206 si:ch211-173n18.3 coding downstream 213594 39499623 ~ 39503381 (+)
XLOC_032194 NA non-coding upstream 323978 38953481 ~ 38955126 (+)
XLOC_032188 CR628341.3 non-coding upstream 688932 38518219 ~ 38590172 (+)
XLOC_032186 CR405707.1 non-coding upstream 901893 38377091 ~ 38377211 (+)
XLOC_032185 NA non-coding upstream 918661 38358681 ~ 38360443 (+)
XLOC_032184 AL935047.1 non-coding upstream 1191493 38087495 ~ 38087611 (+)
XLOC_032208 NA non-coding downstream 246449 39532478 ~ 39541448 (+)
XLOC_032209 AL954698.2 non-coding downstream 380318 39666347 ~ 39667572 (+)
XLOC_032210 AL954698.1 non-coding downstream 414171 39700200 ~ 39717558 (+)
XLOC_032213 NA non-coding downstream 588495 39874524 ~ 39882227 (+)

Expression


Co-expression Network