G1325888



Basic Information


Item Value
gene id G1325888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 74065087 ~ 74065467 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1514118
CCCCAGTTTAACCCAGCCGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCCGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCCGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCAGGTCAGTCCCCAGTTTAACCCAGCAGTACATACCTCCAGGTCAGTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1514118 True 343 lncRNA 0.54 2 74065087 74065467

Neighbor


gene id symbol gene type direction distance location
LOC110527628 dera coding downstream 79586 73972321 ~ 73985501 (-)
LOC118938901 NA coding downstream 135287 73920453 ~ 73929800 (-)
mgst1.1 LOC106590880 coding downstream 162919 73884283 ~ 73902168 (-)
LOC118938851 LOC106575061 coding downstream 162956 73890918 ~ 73902131 (-)
LOC118938934 LOC106594503 coding downstream 726726 73337025 ~ 73338361 (-)
LOC110513406 LOC106576618 coding upstream 101731 74167198 ~ 74213128 (-)
LOC110511321 lemd3 coding upstream 153435 74218902 ~ 74256009 (-)
LOC110491887 tmbim4 coding upstream 292659 74358126 ~ 74374229 (-)
LOC118938857 NA coding upstream 296132 74361599 ~ 74366042 (-)
LOC110514977 NA coding upstream 354461 74419928 ~ 74421766 (-)
G1325869 NA non-coding downstream 50906 74013982 ~ 74014181 (-)
G1325867 NA non-coding downstream 55501 74009332 ~ 74009586 (-)
G1325866 NA non-coding downstream 59704 74005141 ~ 74005383 (-)
G1325864 NA non-coding downstream 61759 74003053 ~ 74003328 (-)
G1325895 NA non-coding upstream 9837 74075304 ~ 74087190 (-)
G1325901 NA non-coding upstream 24780 74090247 ~ 74090807 (-)
G1325892 NA non-coding upstream 38009 74103476 ~ 74105912 (-)
G1325943 NA non-coding upstream 52041 74117508 ~ 74117782 (-)
G1325890 NA non-coding upstream 71229 74136696 ~ 74140081 (-)
G1325863 LOC106584099 other downstream 62338 74002447 ~ 74002749 (-)
G1325780 NA other downstream 329990 73734681 ~ 73735097 (-)
G1325752 NA other downstream 387434 73675338 ~ 73677653 (-)
G1324805 NA other downstream 1158736 72905449 ~ 72906351 (-)
LOC110531910 gsap other downstream 1532072 72500414 ~ 72533138 (-)
G1325915 b2m other upstream 309834 74375301 ~ 74395568 (-)
LOC118938855 LOC106576675 other upstream 539904 74602942 ~ 74607316 (-)
G1326070 NA other upstream 657122 74722589 ~ 74723400 (-)

Expression



Co-expression Network