G1325932


Basic Information

Item Value
gene id G1325932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 74414736 ~ 74505254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1514176
cagacagacagacagacaatggatggtcagcactaaacagtacagacagacagacagacaatggatggtcagcactaaacaagacagacagacaatggatggtcagcactaaacagtacagacagacaatggatggtcagcactaaacagtacagacagacagacagacaatgtatggtcagcactaaacagtacagacagacagacaatggatggtcagcactaaacagtacagacagacagacaatggatggtcagcactaaacaagacagacagacagacaatggatggtcagcactaaacagtacagacagacagacagacaatggatggtcagcactaaaaagtacagacagacagtgatacATCCTATGTTATTATCTCCTGTGTTCGCTGTTTAGTTGAACAACATTCATACATGTGTCATGAAGCTTCATAgccagaagagaacagaacatgATTGGTTTGAATAACAAGTTATTTAATAACAGGCGTCCAAACATCAAGTCAGACTTCACACCATCTAAGTTCTCGCTATTGAAAATACACCATCTAAGTTCTCTCTATTGAAAATACATCACCAATATAAAGTGATACATTAATGCATTTCAgatatttataatatatatatatatatatatatagcccaggtcctactgtataggttaacacattacatagcccaggtcctactgtatagattaacacattacatagcccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacatagcccagatcctactgtataggttaacacattacataacccaggtcctactgtatagattaacacattacatagcccaggtcctactgtatagattaacacattacatagcccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacatagcccagatcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacatagcccagatcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacatagcccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacatggcccaggtcctactgtatagattaacacattacataacccaggtcctactgtatagattaacacattacataacccaggtcctactgtataggttgatacatacatacatacatacgttaTAAGCCTGGCTGCAATTAGGGTGTTCTCCTCTGGTGCAGATTTACAATCCCACAGATATGAGCTTCATTCCTTACACACATCAAATACAACACAAATCAAGCACTGGTCAAATAAAACACAATTTAAGTTCAATGATCAGTCACAATGTTTAGAGACGGAGTCATTACAGATTTCACCTGCAGTGTttagacaggacagtgttgtggagatgagttttgacaggacagtgttgtggagatgaTTCCCAGGAATGTCCGGAGTGGAGATTCTCGGAGGCTGGTGTATTCTGTGgttgtcaacaacaacatcaacaagaaGTCATTCATCTCATCCACATTTCATTTCCACAATGGTTCATGCTTACTTCAGTAAAGCGTCTATATTACACAGTATGCAgtactagggctgggcgatataccATATTTGACTATACACCGGTATTGATGCATGGACCAGTTTGTGTTTTTACTTCACCTTCTATAAAAAGGTATTTCAATGTTAGGTTTGTTAAATTACACCCTACTCCGCTGTGTATAACATCCGTTTTGTTTATAGTTTACtctgctacttgagtcatctctctcctctccatgcaGCTTTCCACACagatctagccccgccccctgtcactcggggagcgatgtttcagatc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612145

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1514176 True 2246 lncRNA 0.39 3 74414736 74505254

Neighbor

gene id symbol gene type direction distance location
LOC110491887 tmbim4 coding downstream 40507 74358126 ~ 74374229 (-)
LOC118938857 NA coding downstream 48694 74361599 ~ 74366042 (-)
LOC110511321 lemd3 coding downstream 158727 74218902 ~ 74256009 (-)
LOC110513406 LOC106576618 coding downstream 201608 74167198 ~ 74213128 (-)
LOC110527628 dera coding downstream 429235 73972321 ~ 73985501 (-)
LOC118938856 LOC106576675 coding upstream 15845 74521099 ~ 74552198 (-)
LOC118938855 LOC106576675 coding upstream 97688 74602942 ~ 74607316 (-)
LOC110514334 mdm2 coding upstream 269193 74774447 ~ 74797613 (-)
LOC110516942 LOC106576641 coding upstream 295309 74800563 ~ 74805861 (-)
LOC110514333 nu107 coding upstream 300755 74806009 ~ 74876319 (-)
G1326009 NA non-coding downstream 2021 74412499 ~ 74412715 (-)
G1326007 NA non-coding downstream 8263 74406187 ~ 74406473 (-)
G1326006 NA non-coding downstream 9393 74401016 ~ 74405343 (-)
G1325926 NA non-coding downstream 18273 74395770 ~ 74396463 (-)
G1326002 NA non-coding downstream 35521 74378601 ~ 74379215 (-)
G1326024 NA non-coding upstream 19815 74525069 ~ 74525895 (-)
G1326030 NA non-coding upstream 33117 74538371 ~ 74540738 (-)
G1326032 NA non-coding upstream 36189 74541443 ~ 74541817 (-)
G1326036 NA non-coding upstream 80472 74585726 ~ 74586202 (-)
G1326023 NA non-coding upstream 102634 74607888 ~ 74608236 (-)
G1325915 b2m other downstream 19168 74375301 ~ 74395568 (-)
G1325863 LOC106584099 other downstream 411987 74002447 ~ 74002749 (-)
G1325780 NA other downstream 679639 73734681 ~ 73735097 (-)
G1326070 NA other upstream 217335 74722589 ~ 74723400 (-)
G1326095 NA other upstream 267045 74772299 ~ 74773953 (-)
G1326164 NA other upstream 547495 75052749 ~ 75053357 (-)
G1326996 NA other upstream 1493252 75998506 ~ 75999000 (-)

Expression


Co-expression Network