XLOC_032206 (si:ch211-173n18.3)


Basic Information

Item Value
gene id XLOC_032206
gene name si:ch211-173n18.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39499623 ~ 39503381 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062921
AACATTGTTTAGGTTTGGTAGTTTTTCATAAAAATGTCGCGTTTTATGGACGCGTGCGCTCTTTCGTTTAAAGTCCTCATTCTCCCGTTGTACATCGCGGAGCATGTCGGACTTTTGTCTTTCTTCAAACGCGTATTTCCTATGATTCAATATAAAGCCACGGACTGGTACAATAACAAGATGAATGACAAGAAACGGGAACTATTTCGAAACCTGGAGCGATTTCAGCCCCCCGAAGGCTCTCTGCGCATCCTGGAGGTGGGCTGTGGATCAGGGGCGAACTTTGAGCACTACCCGACGGGCTCCAAGATCACCTGCACTGACCCTAACCCGCATTTCAAGAAATACCTGGAGAAAAGTATAGAGAAAAACGAGCACCTGGAGTACGACAACTTCATAGTGGCGTCGGGGGAGAATCTGCAGGCAGTGGAGGACAGCTCGGTGGATGCTGTGGTTTGCACTCTGGTTCTGTGCTCGGTCAAAGACACCAACAAAGTTCTGCAAGAGTCAAAGAGGGTCCTGAGACCTggAGGAGCACTTTTCTTTCTTGAGCACGTGGTGTCAGACCCTTCAACCTGGGCTTACTTTTTTCAGCATGTCCTTGAGCcattatgGTACTTCTTTGGCGATGGCTGTGAAGTAACCCGTGCTACATGGAAGCACATTGAGGCCGCTGGATTTTCAGATGTAAAGTTACACCACATTCAAGCTCCTCTGTTTTTCATGCTCAAACCACACATCGTTGGTTATGCAGTCAAGTAATGAATATGAATTTTGCCAGATCaggtctgatttattttaccattCACTAATAATGTGTTTTTATGAAAGAGCAATTTGTAATACACCATAAAGTTTACAGTGCACATTAGTGATTACTTAATCTCAAGATAAGATAGCAATGTAGATTTAATGTAACTGCATTTTTTTGCACAAGT

Function

symbol description
si:ch211-173n18.3 Predicted to enable methyltransferase activity. Orthologous to several human genes including METTL7A (methyltransferase like 7A).

GO:

id name namespace
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-120215-62 Predicted to enable methyltransferase activity. Orthologous to several human genes including METTL7A (methyltransferase like 7A).

Ensembl:

ensembl_id ENSDARG00000028478

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062921 True 938 mRNA 0.44 3 39499623 39503381

Neighbor

gene id symbol gene type direction distance location
XLOC_032205 mettl7a coding upstream 1649 39493864 ~ 39497974 (+)
XLOC_032204 NA coding upstream 120889 39370335 ~ 39378734 (+)
XLOC_032203 krt18b coding upstream 134156 39360377 ~ 39365467 (+)
XLOC_032202 si:dkey-195m11.11 coding upstream 192902 39290777 ~ 39306721 (+)
XLOC_032201 ankrd33ab coding upstream 213594 39279104 ~ 39286029 (+)
XLOC_032207 mettl7a coding downstream 2662 39506043 ~ 39508375 (+)
XLOC_032208 NA coding downstream 29097 39532478 ~ 39541448 (+)
XLOC_032209 AL954698.2 coding downstream 162966 39666347 ~ 39667572 (+)
XLOC_032210 AL954698.1 coding downstream 196819 39700200 ~ 39717558 (+)
XLOC_032211 c1ql4b coding downstream 309094 39812475 ~ 39831089 (+)
XLOC_032194 NA non-coding upstream 544497 38953481 ~ 38955126 (+)
XLOC_032188 CR628341.3 non-coding upstream 909451 38518219 ~ 38590172 (+)
XLOC_032186 CR405707.1 non-coding upstream 1122412 38377091 ~ 38377211 (+)
XLOC_032185 NA non-coding upstream 1139180 38358681 ~ 38360443 (+)
XLOC_032213 NA non-coding downstream 371143 39874524 ~ 39882227 (+)
XLOC_032216 NA non-coding downstream 501214 40004595 ~ 40017137 (+)

Expression


Co-expression Network