G1326046


Basic Information

Item Value
gene id G1326046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 74633885 ~ 74634769 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1514334
cactgaggtttatccacaacaagtcagtttggtgcattacctcgccacacactgaggtttatccacaacaagtcagtttggtgtattacctcatcacacactgaggtttatccacaacaagccagtttggtgcattacctcatcacgcactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacacagaGGTTtctccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtgtatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagttgggtgcattacctcatcacacactgaggtgtatccacaacaagtcagttgggtgcattacctcatcacacactgaggtgtatccacaacaagtcagttgggtgcgttacctcatcacacactgaggtttatccacaacaagtcagtttggtgcgttacctcatcacacacttaGGTTTATcctcaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacacagaGGTTtctccacaacaagtcagtttggtgcattacctcatcacacacagaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcgtcacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1514334 True 885 lncRNA 0.44 1 74633885 74634769

Neighbor

gene id symbol gene type direction distance location
LOC118938855 LOC106576675 coding downstream 27769 74602942 ~ 74607316 (-)
LOC118938856 LOC106576675 coding downstream 81687 74521099 ~ 74552198 (-)
LOC110514977 NA coding downstream 212119 74419928 ~ 74421766 (-)
LOC110491887 tmbim4 coding downstream 259656 74358126 ~ 74374229 (-)
LOC110514334 mdm2 coding upstream 139678 74774447 ~ 74797613 (-)
LOC110516942 LOC106576641 coding upstream 165794 74800563 ~ 74805861 (-)
LOC110514333 nu107 coding upstream 171240 74806009 ~ 74876319 (-)
LOC110490689 rap1b coding upstream 248260 74883029 ~ 74988331 (-)
LOC118938932 NA coding upstream 555852 75190621 ~ 75191934 (-)
G1325931 NA non-coding downstream 19278 74608944 ~ 74614607 (-)
G1326039 NA non-coding downstream 24961 74608718 ~ 74608924 (-)
G1326038 NA non-coding downstream 25259 74608333 ~ 74608626 (-)
G1326023 NA non-coding downstream 25649 74607888 ~ 74608236 (-)
G1326036 NA non-coding downstream 47683 74585726 ~ 74586202 (-)
G1326047 NA non-coding upstream 11557 74646326 ~ 74646845 (-)
G1326050 NA non-coding upstream 20662 74655431 ~ 74655659 (-)
G1326053 NA non-coding upstream 27146 74661915 ~ 74662303 (-)
G1326055 NA non-coding upstream 32257 74667026 ~ 74667659 (-)
G1326056 NA non-coding upstream 41874 74676643 ~ 74677259 (-)
G1325915 b2m other downstream 238317 74375301 ~ 74395568 (-)
LOC110511321 lemd3 other downstream 399071 74218902 ~ 74256009 (-)
LOC110513406 LOC106576618 other downstream 421019 74167198 ~ 74213128 (-)
G1325863 LOC106584099 other downstream 631136 74002447 ~ 74002749 (-)
G1326070 NA other upstream 87820 74722589 ~ 74723400 (-)
G1326095 NA other upstream 137530 74772299 ~ 74773953 (-)
G1326164 NA other upstream 417980 75052749 ~ 75053357 (-)
G1326996 NA other upstream 1363737 75998506 ~ 75999000 (-)
LOC110515635 LOC106576658 other upstream 2783552 77418263 ~ 77506802 (-)

Expression


Co-expression Network