G1326047


Basic Information

Item Value
gene id G1326047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 74646326 ~ 74646845 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1514335
cctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcgtcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgtattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggttcatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcatcacacactgaggtttatccacaacaagtcagtttggtgcattacctcgtcacacactgaggtttatcctcaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1514335 True 520 lncRNA 0.43 1 74646326 74646845

Neighbor

gene id symbol gene type direction distance location
LOC118938855 LOC106576675 coding downstream 40210 74602942 ~ 74607316 (-)
LOC118938856 LOC106576675 coding downstream 94128 74521099 ~ 74552198 (-)
LOC110514977 NA coding downstream 224560 74419928 ~ 74421766 (-)
LOC110491887 tmbim4 coding downstream 272097 74358126 ~ 74374229 (-)
LOC110514334 mdm2 coding upstream 127602 74774447 ~ 74797613 (-)
LOC110516942 LOC106576641 coding upstream 153718 74800563 ~ 74805861 (-)
LOC110514333 nu107 coding upstream 159164 74806009 ~ 74876319 (-)
LOC110490689 rap1b coding upstream 236184 74883029 ~ 74988331 (-)
LOC118938932 NA coding upstream 543776 75190621 ~ 75191934 (-)
G1326046 NA non-coding downstream 11557 74633885 ~ 74634769 (-)
G1325931 NA non-coding downstream 31719 74608944 ~ 74614607 (-)
G1326039 NA non-coding downstream 37402 74608718 ~ 74608924 (-)
G1326038 NA non-coding downstream 37700 74608333 ~ 74608626 (-)
G1326023 NA non-coding downstream 38090 74607888 ~ 74608236 (-)
G1326050 NA non-coding upstream 8586 74655431 ~ 74655659 (-)
G1326053 NA non-coding upstream 15070 74661915 ~ 74662303 (-)
G1326055 NA non-coding upstream 20181 74667026 ~ 74667659 (-)
G1326056 NA non-coding upstream 29798 74676643 ~ 74677259 (-)
G1326059 NA non-coding upstream 36550 74683395 ~ 74683648 (-)
G1325915 b2m other downstream 250758 74375301 ~ 74395568 (-)
LOC110511321 lemd3 other downstream 411512 74218902 ~ 74256009 (-)
LOC110513406 LOC106576618 other downstream 433460 74167198 ~ 74213128 (-)
G1325863 LOC106584099 other downstream 643577 74002447 ~ 74002749 (-)
G1326070 NA other upstream 75744 74722589 ~ 74723400 (-)
G1326095 NA other upstream 125454 74772299 ~ 74773953 (-)
G1326164 NA other upstream 405904 75052749 ~ 75053357 (-)
G1326996 NA other upstream 1351661 75998506 ~ 75999000 (-)
LOC110515635 LOC106576658 other upstream 2771476 77418263 ~ 77506802 (-)

Expression


Co-expression Network