XLOC_032211 (c1ql4b)


Basic Information

Item Value
gene id XLOC_032211
gene name c1ql4b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 39812475 ~ 39831089 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062926
AGGTTTTACAGTTTTGCCAATTTAAAAACTCAGTCAGTCACATGTCAAGATGCCAGAGGAGATTGATCTTGGGACCTGAAGTTTGATGAAGACCAGCAGGGATTGAAAATCACCTAGAGTGCTGTGTGAGCTTGCTTTAATATCATTGTGTATCTCGCCATCTATTTACCATCAGGGTTACAGGACGTTTACAAGCCAACTGCTTAAACCGAACGATTGAAGGtttaagactgtcatgaaagGAGAAAATTGTTTATAACGTGGATTGCTTTCCATCATTTTGAATCACAACCACAGCTTTCTTCTGTGAGAGGAGGGGCAGTTTGTTTAAATGCTGCAGTGGACATGGACTTTTCTGGAAATTTTCCTGAACGCTTCTTGAACTTCTCATGGAGGCTTAAGCCACACCGCTGTCTCTTCATTAATCTTTAGGGAGACGTCACCGTCGCACAGCAACCCCTGAGAAATACACCTCAACATCACCTGATAGAATCTCCATCCACGGGCGAAAATTTGGAGACCCCAAATCCCACATGTTGCTTATATCAGAcaagcaatatatatttatatgacaatataaaCCCACTGGATCATCCAGAATTGCTGTTTATATGGAGCGATAACTGGGCGTCACTCACAAGAGCGAATAGGGGTTAGAGGGCTGCCTGTTGTGATTTAATGTAGTAAAGCAgagcaaaaaaaagagaaattgaaCCTTTTAAAGCAAATGAAGCAACCTTTATTCCATGACGGATATCTACTTTGTTGCTGGAGTTGTTGCTGGATGGAAAAACAATTCTAAGATACAGCCAGCATTTTCTCACATTGTATTCTCTCGTTAAGAGTTTCTATTTCACCGTAGTCCTTTTTCCTTCCCAGAGATCATTCTGGCCGGGCCTGTTTCTTCTAAAGGAGAGGAGGACTTCCTCTCTATCGCTGCCTCACGCCTCAGCCGCAGGAAGCGCGTTATTGGCGCGGCAGTGGGTGTGGCCATGGTGCTGGTGCTACTGGTCACTATTCCACTATTGGTCCACAGCACCAAACTGGGTGGTTCTGGTGGTGGAGGTACACATTATGAAATGCTTGGCAGCTGCAAGATGGTCTGTGACTCTTTAACACCCACTAATGAACTAACGCCTGTTTCACCTCCTCCTCGCGACATCCCTGGACGCAAAGGAGGAGCCAAGTCTGGTTTTCGTGGAAACCAAGGCCTACCAGGTCCCCCCGGTCCACGTGGGCCACCTGGAGAACCAGGAAAACCAGGTCCACCTGGACCTCCAGGTCCAGGCCCTGGGGGATACATCCCATCCTTCTACAGCCCCAAAATAGCCTTCTATGCTGGTCTGCGCAAGCAACATGAGGGGACCGAGGTACTCAAGTTTGATGATGTGGTGACAAATGTTGGGAATTACTATGAGCCTACCACAGGCAAGTTCACCTGCCCTCTTCCTGGAATCTACTTCTTCACTTATCACGTGCTCATGAGGGGTGGAGATGGAACGAGCATGTGGGCCGACCTCAAGAAAAATGGACAGGTGAGGGCCAGTGCGATCGCTCAGGACGCAGATCAGAATTATGACTACGCCTCTAACAGTGTGATCCTGCATTTAGATGTGGGGGATGAGGTCTGTGTGCAGCTCGATGGAGGAAAAGTGCACGGTGGAAACACCAACAAATACAGCACATTCAGCGGCTTTCTCATCTACCCCGACTAGCATACTGTACAAAAACACAGATACATGATCACTTATTTAATGCCAGTGAAAAAGCAACATATACTAGTGAAACAACATGATATAACATCAAGAGTCATTTTAATTTTCCTTAGAGTATACTTTCAGATTTTAAAGTCAACAACACTTGATGCATTTGGCTTTATTATTTGATGCAattccagtttttttttcaaagtaaagaTACTTGATTGTATTCATTGGCAGTTGGATTgatttgtaaaaacaaagttGTCTCAGGGGCATCTAAATTTTATCTAGTTCAATTCAAAACATCTGTTTTACGTTTATATGAATTTCAGATGGAGAAAAAAGCTAAAAATGAATTAAGATAACAGACATTCATATGTATTCTCTGAAAACAAATCTtactgattaattgattaatttgttaacattaattaattacagATGCTCTAAGCAAAACACacttgcagccaatcagcagtgaGGGGTGTGTTTAATGATAATAAAGATACAAAGAAGCATTGGGTTGATTGGGCTATGGGCTCAAGTAATGTTTTGTTGCTTTCAgatataaacataatttggcaaaATGGTTTTATAACAATGAACAATTTTACTGCATTCAATAATCATACTCGATGTTGATATCAACCATTTCAAAGACATTTTAACTGAATTTAATGTTACATCATATGTGTGTTACCTTTATTAACACACATAGAAGAAAATGCTGCAAAATTGTTGCTAAccctgggttatttcaacccaattttgGGTGTAATAGAGACTAACCCAACCGCtggattaaatattttaattaagttaccttaattcAACATTGGATTAATCCACGTTTTAGCCAAATTCAGTTAAAATacccagcagtttttattttaatcgcTAGTTTATGTTAAAGCATGTTAACAAATTAGACCTTGTGCCCTTAATTACTTATTACTTAATTAATGACATTATGTAAAGATTACTTACAAAATCTAATTTCGGCAAAgc

Function

symbol description
c1ql4b Is expressed in habenula. Orthologous to human C1QL4 (complement C1q like 4).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-59 Is expressed in habenula. Orthologous to human C1QL4 (complement C1q like 4).

Ensembl:

ensembl_id ENSDARG00000055317

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062926 True 2711 mRNA 0.41 2 39812475 39831089

Neighbor

gene id symbol gene type direction distance location
XLOC_032210 AL954698.1 coding upstream 94917 39700200 ~ 39717558 (+)
XLOC_032209 AL954698.2 coding upstream 144903 39666347 ~ 39667572 (+)
XLOC_032208 NA coding upstream 271027 39532478 ~ 39541448 (+)
XLOC_032207 mettl7a coding upstream 304100 39506043 ~ 39508375 (+)
XLOC_032206 si:ch211-173n18.3 coding upstream 309094 39499623 ~ 39503381 (+)
XLOC_032212 smarcc2 coding downstream 5385 39836474 ~ 39866670 (+)
XLOC_032213 NA coding downstream 43435 39874524 ~ 39882227 (+)
XLOC_032214 endou coding downstream 73932 39905021 ~ 39912440 (+)
XLOC_032215 itpr1a coding downstream 91963 39923052 ~ 39991554 (+)
XLOC_032216 NA coding downstream 173506 40004595 ~ 40017137 (+)
XLOC_032204 NA non-coding upstream 433741 39370335 ~ 39378734 (+)
XLOC_032194 NA non-coding upstream 857349 38953481 ~ 38955126 (+)
XLOC_032217 CU467879.1 non-coding downstream 212526 40043615 ~ 40049445 (+)
XLOC_032220 BX936393.2 non-coding downstream 617545 40448634 ~ 40451840 (+)
XLOC_032222 CU463231.2 non-coding downstream 644622 40475711 ~ 40481777 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_09293326_09302243 C1QL4, C1QL4B coding CI01000340 null 9293184 ~ 9302415 (+)