G1326370


Basic Information

Item Value
gene id G1326370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 75294849 ~ 75297541 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1514781
ATATAGAATAGGGGTTAGTTAATAATATATAGAATAGGGGTTAGACTgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgatcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgatcagcagcagtgatatattagactgagtagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagtgatatattagactgagcagcagcagtgatatattagactgagcagcagcagtgatatattagactgagctGATGAATAGGATGTTAATGTATAGCAGCAGTAGGGTACCAAGAAGAGGTATGATACCGGAGTCTGTTTACAGGTACGGACAGACCAGTAGGGTTTCCGTCCGAGAGTCACCCAAACTGACGTACTAATTTATACTCCACACATGGTGACATATTAACATGTGAGTCCTTTATAGCCTCAGCTGATTGGCACTGAACTTTCTCCCTGCTCGCCCAAAATACCTCCATCTCCGTCAAATCAAGATATACCAGGAGTTATTTAAGAGGGCTATTCTCGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1514781 True 1238 lncRNA 0.41 5 75294849 75297541

Neighbor

gene id symbol gene type direction distance location
LOC118938932 NA coding downstream 102915 75190621 ~ 75191934 (-)
LOC110490689 rap1b coding downstream 306518 74883029 ~ 74988331 (-)
LOC110514333 nu107 coding downstream 418530 74806009 ~ 74876319 (-)
LOC110516942 LOC106576641 coding downstream 488988 74800563 ~ 74805861 (-)
LOC110514334 mdm2 coding downstream 497236 74774447 ~ 74797613 (-)
LOC110518764 LOC106576636 coding upstream 222760 75520301 ~ 75547039 (-)
LOC110490682 cand1 coding upstream 267067 75564608 ~ 75648161 (-)
LOC110513781 LOC106599032 coding upstream 1180008 76477549 ~ 76499886 (-)
LOC118936278 irak3 coding upstream 1202578 76500119 ~ 76525322 (-)
LOC110514961 LOC106590998 coding upstream 1377580 76675121 ~ 76681446 (-)
G1326325 NA non-coding downstream 17834 75276594 ~ 75277015 (-)
G1326261 NA non-coding downstream 93598 75109614 ~ 75201251 (-)
G1326283 NA non-coding downstream 136956 75157283 ~ 75157893 (-)
G1326281 NA non-coding downstream 143486 75150581 ~ 75151363 (-)
G1326174 NA non-coding downstream 221565 75069361 ~ 75073284 (-)
G1326372 NA non-coding upstream 5946 75303487 ~ 75303857 (-)
G1326387 NA non-coding upstream 49483 75347024 ~ 75347304 (-)
G1326391 NA non-coding upstream 53401 75350942 ~ 75351303 (-)
G1326394 NA non-coding upstream 60388 75357929 ~ 75359463 (-)
G1326396 NA non-coding upstream 63426 75360967 ~ 75361930 (-)
G1326164 NA other downstream 241492 75052749 ~ 75053357 (-)
G1326095 NA other downstream 520896 74772299 ~ 74773953 (-)
G1326070 NA other downstream 571449 74722589 ~ 74723400 (-)
LOC118938855 LOC106576675 other downstream 687533 74602942 ~ 74607316 (-)
G1325915 b2m other downstream 899281 74375301 ~ 74395568 (-)
G1326996 NA other upstream 700965 75998506 ~ 75999000 (-)
LOC110515635 LOC106576658 other upstream 2120780 77418263 ~ 77506802 (-)
G1328123 NA other upstream 2573738 77871279 ~ 77874604 (-)
LOC118938867 LOC106576670 other upstream 3001035 78298576 ~ 78452504 (-)
G1328815 NA other upstream 3465558 78763099 ~ 78766048 (-)

Expression


Co-expression Network