XLOC_032220 (BX936393.2)


Basic Information

Item Value
gene id XLOC_032220
gene name BX936393.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40448634 ~ 40451840 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062939
attttgcattttattttgtgatattttataTTTAGGTTGTACCTGTAATCACTAGTTTTTTAAAGAGTGTTTTATATTTGATACTTTTATACTTTCtaaatttttaaatcaaacatttgccctgaagttccaaataaagtgagaaatataATCACATTTGAGTGAGTAAAccactttaaaatgttaatggtCAATGTATATAACattgaatttacagaaatagGTCTGGGCAATATGACAAAAATATCATATCACGATCCTGAAAACATCTCATGTGTCATCTCATCCTGATAACTCCTGATAACTAAGTCATCTAACGTAATCAAGCTAACTTAAGTGAATTCTGAAATTGACTGATTTCGAGGTTCTTCGTGAAAATAGGAACAAAAAAGCTTTAAATTTCAAGTGGAAACGGAAGAGTACAACTAAATCATCTTGTAATGCGTAAACACTAAAGCTCAAACTTAGCAacatatctttttaaaaaataaacggTCAATTGAAGTTAAAAACGGCGTCTCTTTTATAGGTCTACATGTGTATATTTGCATaggtttgtaaacaaaaaaaaaacatgtatacgAAGCAAAACGCGTAAATCAGTAGTCATATGTTATCTAATGTTACAGATGCTAATATTTAGCAGAAAGCGCACGCCTGACCTAAAACTGTGAGCCCTGGCGTGAGAGTCCATAACGGCGATCACAAGAACGGAAAACAGTCGGAAAGTGTGTAAGGCTTGATTAAACCCGATTCAGTCCAAATTACGGCAATTTGTTGTTACTGACCTTAAGGCACACTGATGATGAAATTCAGGTGGATCAATTAACGTTAGCGATGGACAGTCATTCCCGGCCTGCACGACGGCGAACGCTGCTTGATTGAGCAGTATGAAGTATGGAGCGAGCACATGGGACTATTAACCACACGAAGACTACTAATTCTCTGTTCTCCAGTAACTTCTGTTCCACCCGCTGGCTAATGCGTTGTAGATCAGCCTGAATGCTGGGTCTCTGAGCTAGATCCTCTTGAAGGCAGCGGGCAATCTCCAGACAGCCGACATCTTCCCTGCGCACCAACCGTCTCACAACTTGCAGACAGCGATCTCGCAACGTCAGCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098407

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062939 True 1120 lncRNA 0.38 2 40448634 40451840

Neighbor

gene id symbol gene type direction distance location
XLOC_032219 ghrl coding upstream 9019 40437987 ~ 40439615 (+)
XLOC_032218 slc4a8 coding upstream 42700 40354424 ~ 40405934 (+)
XLOC_032217 CU467879.1 coding upstream 399189 40043615 ~ 40049445 (+)
XLOC_032216 NA coding upstream 431497 40004595 ~ 40017137 (+)
XLOC_032215 itpr1a coding upstream 457080 39923052 ~ 39991554 (+)
XLOC_032221 zgc:152986 coding downstream 15722 40467562 ~ 40470521 (+)
XLOC_032222 CU463231.2 coding downstream 23871 40475711 ~ 40481777 (+)
XLOC_032223 fgd5b coding downstream 30490 40482330 ~ 40499799 (+)
XLOC_032224 prkcda coding downstream 71530 40523370 ~ 40544207 (+)
XLOC_032225 NA coding downstream 94018 40545858 ~ 40551992 (+)
XLOC_032213 NA non-coding upstream 566407 39874524 ~ 39882227 (+)
XLOC_032210 AL954698.1 non-coding upstream 731076 39700200 ~ 39717558 (+)
XLOC_032209 AL954698.2 non-coding upstream 781062 39666347 ~ 39667572 (+)
XLOC_032231 NA non-coding downstream 201065 40652905 ~ 40656046 (+)
XLOC_032242 NA non-coding downstream 532757 40984597 ~ 40986135 (+)
XLOC_032245 NA non-coding downstream 628670 41080510 ~ 41082985 (+)

Expression


Co-expression Network