XLOC_032226 (ddi2)


Basic Information

Item Value
gene id XLOC_032226
gene name ddi2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40554551 ~ 40563509 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062946
AATTATTTAGTGAATTGAGGTTGTTCGTTCAGTTGTTTCTCCATGCGCTTAACTTTTTTCATTATCACATTTTACACTGAGTGTCAACAGGACAGCCTTGGATACATTTCCGACAGAAAACTCTAGAGCAGGGGCAGTTTCTGACAGCGAGAGAGAAGCAGTAACCGGGCAATGCTGCTCACCGTGTTTTGTGCACCGAGAGACCGCTCGGAAACCACTTTCGCCCTGGACGTGTCCCCGGAGCTTGAACTCAGGGATTTCTTGGCTCTTTGCGAACTAGAATCAGGAATACCAGCCGGGGAAATTCAGATCATATATGCAGAGCAGCCTTTACAAGACCCCACCCGGGCCCTGGGGAACTATGGCCTGAAAGATGGAGATGTGCTGGTGTTAAGACAAGCAGAGAGGTTACGAGCACCACCACAGCCCACAGTTCCAGGCCTGCCTCGCATCGACTTCAGTTCCATTGCTGTTCCTGGGACGTCCTCAGGCCAAAACAGAAACAGACCGCAACAAGCCCAGCGTCCCAGTACAACCCAGCCACCACCACCCCAAGCCACCACTTCTCCAGGTTCAGGCGTTTCTCCTCAGGGATTGGACAACCCTGCCTTGCTACGAGACATGTTATTGGCAAATCCACATGAGCTGTCGCTTCTGAAGGAGCGCAACCCTCCACTTGCTGAAGCTCTGCTGAGTGGAGATCTTGAGCGCTTCACTAAGGTGCTAATGGAGCAGCAGCAGGACCGGGCACGGAGAGATCAGGAGAGAATCAAACTGCTGACTGCAGATCCTTTTGACTTGGACGCTCAGGCCAAGATTGAGGAGGAAATCAGACAGCACAACATTGAGGAGAATATGACCATTGCTATGGAAGAAGCACCTGAAAGTTTTGGCCAGGTTGTGATGCTCTACATCAACTGCAAAGTCAATGGACATCCAGTAAAGGCCTTTGTTGACTCGgGTGCCCAGATGACAATAATGAGCCAAGCATGTGCAGAGCGATGTAATATCATGCGCCTAGTGGACAGACGCTGGGCAGGCATTGCCAAAGGTGTTGGCACCCAGAAAATCATTGGCCGAGTTCACTTGGCCCAGGTGCAGATTGAAGGGGATTTTCTACCGTGCTCCTTCTCCATTTTGGAAGATCAGCCCATGGATATGCTGCTAGGCCTTGATATGCTGAAGAGACACCAGTGTTCTATCGACCTAAAGAAAAATGTCCTCCTTATTGGGACAACGGGTACAGAGACACGCTTTCTACCTGAGGCAGAGCTGCCTGAATGTGCTCGGCTAGCTTACGGGCCAGAGGGACGAGAAGAGCCCCGGCCTGATGAGATTGCAGATCGAGAACTGGCTGAGGCAATACAAAGATCTGTACAGGACAGCGCAGGACAGAACTGATGTCATGTGGACATATATGGACAGCTGGAGAGGGCTCTACCTACCAGATTTTGAAGATGGAAAAACTACCTCACCACAATCCCTGCCCTTTAAACCTCTCAACCAACCCACATCTTCAGCCTCGAGTCATCCCCACAATCTCACACTAGACCGGTCCAGGTCTGCCCCAGCCTCTATAAACCAAGGAGTGACCCCAATTGAAATTTCCACACCGATTAAATCTTCACCACTTCCACCATTGGCTGCGGGTAAACCCTCTCCAGAATCCCCTGATGACACCATCAGATCTCAGTCCCAAGGACTGGCAGATGCCACATCATCCAGCTTGCAGACAGATGCAGATGCTCCCATCCCAAGCACTCTTCCCTCTCAGGAACCATTCTCTAGTACTGTGCCCGAGGACAATGAAGTGACCGGCAGCATAGCTACAGGAGATTACAGCAATCCAATGGACACCGTTTTGGGGAAGTCTATTACTTCCTCAGGGACTGTATCAACAGAAGCTCCTTTTATTGTCTTTAACCCAAGCTCACAGACTCAGACACTGGATCAGGAAATGGACATGGATGTTTCTTACAATGCAAAACCAGAAATTGGCCATGACTTGTCTGATCAGTTTCAGAGTACCCAAGGTGATGTAACTGAAGATGTTTCACAGGCTCAAGTTCCAGATTTGAACCTTGAACCCTGTTCTGTTGAGCCAGCCACTTCTTCTGTCTTTCCAGACCCTGAAAAGAGTGTAATACCCTATGAAAGAGACCAGTCAGAGGTGGATAATGTCCCTCCTCTGGCTCAAGCCCTTAAAGAACTCCATAAACTTCTTATGTCTAGTAGTTGGCCAACGGTTTCTGGAAGGATTCCTCTATCTCACCCTAATGGTACAGCACCAAGTCTAGATGTAGATGAGCTGAATCTGGATCCTGATGCAAGAAACCACACAACTCTGAACCCGACTGCTGACTCGTCTTCTAATACTGCCACAACAGATGACAAAGAGGAGGAAAGTGTTGCCAAAGCTGACTTGACTTCACGATCAGTGAGGGATTCTCCAGATTTACACTCAAGCAATTCATGGCACACAGAGAACCATCTTTCTAGACAGGCGGATCCCATAGTGGAACAAACCATTCAGCACCCTCTTCCTGGTGGAAGTCAGGACCTTAATTTTGAAGAAGGTTCAGTATCGGTGACTTCTTCCCAAGGAGATTGTGAACTCCCCGAGGATCAGCAAGGGAATGACATTATGGGTGAAAAAACCTCAGGCATTGACATCTCAGCTGACCCGTCTCAGCAGCACCCGCTTTCTGTAGCAGCTGGCCCATCAACCAATCCCAGCCTAGGGCCTGTTGCATCTCCTCAAAGTCAAGCCCCTGAGATGGATCCTGTTTTTCTTGGAGACACCATCCAGTCTGCTCCACAGCCCTCGATGGGACAGTTTCCACTAGAGCACATTCATAGGATCCAGGCATCTGGGTTTTCAGCCCATGAGGCTGCTGAGGCACTAGAACAGGCTCAAGGAAGCGTGGAGCTTGCCTTATTGGTGCTGCTTGCACGAAACATCACTGTGCCCACTTAGAATTAACTCCTATGGGTGGCATCGGTTAACACATTAGCCTTTTTTCCATCAGTGGGTTTTCTTTTAGGAGtccaggtgttttttttttttttttacttattggtCTTTTTTTGgccaaaatacaaaatgtttaacGAACAGATTTGTGAGAAGCTGGCTGTATTTCACTTTCAACAGAATGATAATATCTGTGCATTTTTTATTAAGGTTTTGCATGTTGCCTCAATAGTTCGTAATGGATTGTTGATTTTATTGGTTTGGTTTGAATAAATTTGATAAACATTTTACAGGAATGTGAATAGTTTACTTGAGGTGGTGGGGCTCGGTAATACAATTCTTCAAAACTAGACCGGTTTCCTATTATCCAACAACTGCATGGATTTAGATTGCAAAGATTTGTGCCTGATGTTGACTGACCTTAAACAGAAATGATGAAGCATCTTACTAAATACATTTTGTGTAAAAGTAATAGCAGCGGATAGTAAACTGGTAAACCACCCATTTCAGAATCCCTTTCCAAATTTGAGTTGGCAATAATGTTTAAGCTGAGGTAATTTTCtcttaattttgttttgataGTTGCCAATCCTGTATGACTTGACATGTTTTTAATAGGTTGCCTTTGGAAATTATTAGCAGTAGACTTAAATACCATAACCTTTGTGTTCATAGTCCATCTTTGAGCAAGTATGTTCTGTATTATATAAAACAGTTCTGAAGGGGAAGGTATAACATACTTTTATTATCAGTAGTATGTCTTTTACCAGATGTTGTGGTAGtgttttataatgttttcatttaaattaaattgacagGAAAAAGGTGGTGCTAATAAAGTAGTCTACAGGAGTTTTTTTTCCCCATCCACCACTACACTTTGTTGGGATGTCTGTTCTGTTTATCTTATTTGTTGTCTCTTGTCTAAACACTCAATTTGGGTGTAAAGTCCTAATGTACCCTTTTCAGCTGTCTGTGCAGTTTTGTCATGTCTACCCTCTTGTTTAGTAATCTCTGGGTCATATATCAGTTGTTCAATCAATTCGAGAAACTGTTTCATCTTGTATACagtttaaaaaccaaataaaatgaaaaaaatgattctTATA
>TCONS_00062947
CATTATCACATTTTACACTGAGTGTCAACAGGACAGCCTTGGATACATTTCCGACAGAAAACTCTAGAGCAGGGGCAGTTTCTGACAGCGAGAGAGAAGCAGTAACCGGGCAATGCTGCTCACCGTGTTTTGTGCACCGAGAGACCGCTCGGAAACCACTTTCGCCCTGGACGTGTCCCCGGAGCTTGAACTCAGGGATTTCTTGGCTCTTTGCGAACTAGAATCAGGAATACCAGCCGGGGAAATTCAGATCATATATGCAGAGCAGCCTTTACAAGACCCCACCCGGGCCCTGGGGAACTATGGCCTGAAAGATGGAGATGTGCTGGTGTTAAGACAAGCAGAGAGGTTACGAGCACCACCACAGCCCACAGTTCCAGGCCTGCCTCGCATCGACTTCAGTTCCATTGCTGTTCCTGGGACGTCCTCAGGCCAAAACAGAAACAGACCGCAACAAGCCCAGCGTCCCAGTACAACCCAGCCACCACCACCCCAAGCCACCACTTCTCCAGGTTCAGGCGTTTCTCCTCAGGGATTGGACAACCCTGCCTTGCTACGAGACATGTTATTGGCAAATCCACATGAGCTGTCGCTTCTGAAGGAGCGCAACCCTCCACTTGCTGAAGCTCTGCTGAGTGGAGATCTTGAGCGCTTCACTAAGGTGCTAATGGAGCAGCAGCAGGACCGGGCACGGAGAGATCAGGAGAGAATCAAACTGCTGACTGCAGATCCTTTTGACTTGGACGCTCAGGCCAAGATTGAGGAGGAAATCAGACAGCACAACATTGAGGAGAATATGACCATTGCTATGGAAGAAGCACCTGAAAGTTTTGGCCAGGTTGTGATGCTCTACATCAACTGCAAAGTCAATGGACATCCAGTAAAGGCCTTTGTTGACTCGgGTGCCCAGATGACAATAATGAGCCAAGCATGTGCAGAGCGATGTAATATCATGCGCCTAGTGGACAGACGCTGGGCAGGCATTGCCAAAGGTGTTGGCACCCAGAAAATCATTGGCCGAGTTCACTTGGCCCAGGTGCAGATTGAAGGGGATTTTCTACCGTGCTCCTTCTCCATTTTGGAAGATCAGCCCATGGATATGCTGCTAGGCCTTGATATGCTGAAGAGACACCAGTGTTCTATCGACCTAAAGAAAAATGTCCTCCTTATTGGGACAACGGGTACAGAGACACGCTTTCTACCTGAGGCAGAGCTGCCTGAATGTGCTCGGCTAGCTTACGGGCCAGAGGGACGAGAAGAGCCCCGGCCTGATGAGATTGCAGATCGAGAACTGGCTGAGGCAATACAAAGATCTGTACAGGACAGCGGTAAGATgcatgatatgtagattaagaaATGGCATGACGTAAGGGTTGAAATTAAAGCTAGTTAGTGTTTAACACAAGGAATGAATACTCATCACAGATGTGTCGCATTGTGAGGG

Function

symbol description
ddi2 Predicted to enable aspartic-type endopeptidase activity and identical protein binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Predicted to act upstream of or within proteolysis. Predicted to be located in chromosome and cytosol. Orthologous to several human genes including DDI2 (DNA damage inducible 1 homolog 2).

GO:

id name namespace
GO:0072711 cellular response to hydroxyurea biological_process
GO:0016485 protein processing biological_process
GO:0031647 regulation of protein stability biological_process
GO:0010498 proteasomal protein catabolic process biological_process
GO:0006508 proteolysis biological_process
GO:0097752 regulation of DNA stability biological_process
GO:0005829 cytosol cellular_component
GO:0005694 chromosome cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004190 aspartic-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0042802 identical protein binding molecular_function
GO:0008233 peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-031030-15 Predicted to enable aspartic-type endopeptidase activity and identical protein binding activity. Predicted to be involved in several processes, including cellular response to hydroxyurea; proteolysis; and regulation of DNA stability. Predicted to act upstream of or within proteolysis. Predicted to be located in chromosome and cytosol. Orthologous to several human genes including DDI2 (DNA damage inducible 1 homolog 2).

Ensembl:

ensembl_id ENSDARG00000006477

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062946 False 4083 mRNA 0.45 10 40554551 40563509
TCONS_00062947 True 1444 mRNA 0.51 8 40554610 40560065

Neighbor

gene id symbol gene type direction distance location
XLOC_032225 NA coding upstream 2559 40545858 ~ 40551992 (+)
XLOC_032224 prkcda coding upstream 10344 40523370 ~ 40544207 (+)
XLOC_032223 fgd5b coding upstream 54752 40482330 ~ 40499799 (+)
XLOC_032222 CU463231.2 coding upstream 72774 40475711 ~ 40481777 (+)
XLOC_032221 zgc:152986 coding upstream 84030 40467562 ~ 40470521 (+)
XLOC_032227 si:ch73-15b2.5 coding downstream 339 40563848 ~ 40572550 (+)
XLOC_032228 uqcc2 coding downstream 9856 40573365 ~ 40577109 (+)
XLOC_032229 frs3 coding downstream 24042 40587551 ~ 40606273 (+)
XLOC_032230 slc6a11a coding downstream 65557 40629066 ~ 40646203 (+)
XLOC_032231 NA coding downstream 89396 40652905 ~ 40656046 (+)
XLOC_032220 BX936393.2 non-coding upstream 102711 40448634 ~ 40451840 (+)
XLOC_032217 CU467879.1 non-coding upstream 505106 40043615 ~ 40049445 (+)
XLOC_032216 NA non-coding upstream 537414 40004595 ~ 40017137 (+)
XLOC_032242 NA non-coding downstream 421088 40984597 ~ 40986135 (+)
XLOC_032245 NA non-coding downstream 517001 41080510 ~ 41082985 (+)
XLOC_032251 AL732567.2 non-coding downstream 631178 41194687 ~ 41194801 (+)
XLOC_032256 dre-let-7j non-coding downstream 891282 41454791 ~ 41454873 (+)

Expression


Co-expression Network