G1327165



Basic Information


Item Value
gene id G1327165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 76474222 ~ 76474551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1515845
tctgtaaatcacctcagccatgttgtttatttttccaCTCTGTAAATCTTTTTTTATTGTTTCTCTTTTCTCGGCCATACAAAGGTTTACAGCTGGAGGAATTCCCAAAGTTATACATAGACGATAAATATCATGCTACCAAAGTATTAAATTTGTACAAAAATACTTTTACAGGTCATAATACCGGTCCAttagaaataaaaatacaatttttcAGGGACTTAAACAGTGAGTTTCTTTAACTGTATCATACATTGAATGATGGTTGACCCCACTATGGTAATTGGCAGTGTGTACTCCAGTATTAAGAACAGAAAAATGACCACTCCA

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1515845 True 330 lncRNA 0.33 1 76474222 76474551

Neighbor


gene id symbol gene type direction distance location
LOC110490682 cand1 coding downstream 826061 75564608 ~ 75648161 (-)
LOC110518764 LOC106576636 coding downstream 927183 75520301 ~ 75547039 (-)
LOC118938932 NA coding downstream 1282288 75190621 ~ 75191934 (-)
LOC110490689 rap1b coding downstream 1485891 74883029 ~ 74988331 (-)
LOC110514333 nu107 coding downstream 1597903 74806009 ~ 74876319 (-)
LOC110513781 LOC106599032 coding upstream 2998 76477549 ~ 76499886 (-)
LOC118936278 irak3 coding upstream 25568 76500119 ~ 76525322 (-)
LOC110514961 LOC106590998 coding upstream 200570 76675121 ~ 76681446 (-)
LOC110512778 trhde coding upstream 396916 76871462 ~ 77277803 (-)
LOC118938902 NA coding upstream 876727 77351278 ~ 77352450 (-)
G1327167 NA non-coding downstream 2097 76469915 ~ 76472125 (-)
G1327107 NA non-coding downstream 179457 76294202 ~ 76294765 (-)
G1327091 NA non-coding downstream 218194 76255623 ~ 76256028 (-)
G1327085 NA non-coding downstream 240572 76233448 ~ 76233650 (-)
G1327081 NA non-coding downstream 258565 76215420 ~ 76215657 (-)
G1327175 NA non-coding upstream 17016 76491567 ~ 76492247 (-)
G1327196 NA non-coding upstream 79246 76553797 ~ 76554211 (-)
G1327209 NA non-coding upstream 88941 76563492 ~ 76563843 (-)
G1327213 NA non-coding upstream 93946 76568497 ~ 76568725 (-)
G1326996 NA other downstream 475222 75998506 ~ 75999000 (-)
G1326164 NA other downstream 1420865 75052749 ~ 75053357 (-)
G1326095 NA other downstream 1700269 74772299 ~ 74773953 (-)
G1326070 NA other downstream 1750822 74722589 ~ 74723400 (-)
LOC118938855 LOC106576675 other downstream 1866906 74602942 ~ 74607316 (-)
LOC110515635 LOC106576658 other upstream 943770 77418263 ~ 77506802 (-)
G1328123 NA other upstream 1396728 77871279 ~ 77874604 (-)
LOC118938867 LOC106576670 other upstream 1824025 78298576 ~ 78452504 (-)
G1328815 NA other upstream 2288548 78763099 ~ 78766048 (-)
G1328861 NA other upstream 2395774 78870325 ~ 78871031 (-)

Expression



Co-expression Network