Gene
RNA
| Item | Value |
|---|---|
| gene id | G1327292 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 76634599 ~ 76635961 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1515992 | False | 271 | lncRNA | 0.40 | 2 | 76634599 | 76635961 |
| TU1515993 | True | 403 | lncRNA | 0.41 | 3 | 76634599 | 76635961 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936278 | irak3 | coding | downstream | 109277 | 76500119 ~ 76525322 (-) |
| LOC110513781 | LOC106599032 | coding | downstream | 134713 | 76477549 ~ 76499886 (-) |
| LOC110490682 | cand1 | coding | downstream | 986438 | 75564608 ~ 75648161 (-) |
| LOC110518764 | LOC106576636 | coding | downstream | 1087560 | 75520301 ~ 75547039 (-) |
| LOC118938932 | NA | coding | downstream | 1442665 | 75190621 ~ 75191934 (-) |
| LOC110514961 | LOC106590998 | coding | upstream | 39160 | 76675121 ~ 76681446 (-) |
| LOC110512778 | trhde | coding | upstream | 235506 | 76871462 ~ 77277803 (-) |
| LOC118938902 | NA | coding | upstream | 715317 | 77351278 ~ 77352450 (-) |
| LOC110515635 | LOC106576658 | coding | upstream | 782302 | 77418263 ~ 77506802 (-) |
| LOC118936539 | LOC106597902 | coding | upstream | 878325 | 77514286 ~ 77515212 (-) |
| G1327213 | NA | non-coding | downstream | 65874 | 76568497 ~ 76568725 (-) |
| G1327209 | NA | non-coding | downstream | 70756 | 76563492 ~ 76563843 (-) |
| G1327196 | NA | non-coding | downstream | 80388 | 76553797 ~ 76554211 (-) |
| G1327175 | NA | non-coding | downstream | 142352 | 76491567 ~ 76492247 (-) |
| G1327293 | NA | non-coding | upstream | 531 | 76636492 ~ 76636719 (-) |
| G1327300 | NA | non-coding | upstream | 32404 | 76668365 ~ 76668596 (-) |
| G1327302 | NA | non-coding | upstream | 35811 | 76671772 ~ 76672138 (-) |
| G1327308 | NA | non-coding | upstream | 65070 | 76701031 ~ 76701379 (-) |
| G1327324 | NA | non-coding | upstream | 95979 | 76731940 ~ 76732518 (-) |
| G1326996 | NA | other | downstream | 635599 | 75998506 ~ 75999000 (-) |
| G1326164 | NA | other | downstream | 1581242 | 75052749 ~ 75053357 (-) |
| G1326095 | NA | other | downstream | 1860646 | 74772299 ~ 74773953 (-) |
| G1326070 | NA | other | downstream | 1911199 | 74722589 ~ 74723400 (-) |
| LOC118938855 | LOC106576675 | other | downstream | 2027283 | 74602942 ~ 74607316 (-) |
| G1328123 | NA | other | upstream | 1235318 | 77871279 ~ 77874604 (-) |
| LOC118938867 | LOC106576670 | other | upstream | 1662615 | 78298576 ~ 78452504 (-) |
| G1328815 | NA | other | upstream | 2127138 | 78763099 ~ 78766048 (-) |
| G1328861 | NA | other | upstream | 2234364 | 78870325 ~ 78871031 (-) |
