Gene
RNA
| Item | Value |
|---|---|
| gene id | G1327360 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 76775138 ~ 76798768 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1516071 | False | 804 | lncRNA | 0.40 | 2 | 76775138 | 76776174 |
| TU1516072 | True | 314 | lncRNA | 0.37 | 2 | 76775138 | 76798768 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938861 | grip1 | coding | upstream | 304321 | 75732149 ~ 76472933 (+) |
| LOC118938860 | NA | coding | upstream | 1403075 | 75366958 ~ 75372063 (+) |
| LOC110499731 | dyrk2 | coding | upstream | 1408949 | 75332550 ~ 75366189 (+) |
| LOC118938859 | LOC106593189 | coding | upstream | 1502531 | 75251801 ~ 75272607 (+) |
| LOC118938933 | ifngamma1 | coding | upstream | 1546273 | 75224113 ~ 75228865 (+) |
| LOC118938862 | NA | coding | downstream | 617819 | 77416342 ~ 77505819 (+) |
| LOC118938903 | NA | coding | downstream | 1012073 | 77810841 ~ 77812644 (+) |
| LOC110490691 | arhgef39 | coding | downstream | 1160203 | 77958971 ~ 78066964 (+) |
| rergla | LOC106609822 | coding | downstream | 1296763 | 78095531 ~ 78107017 (+) |
| il17r | il17r | coding | downstream | 1324314 | 78123082 ~ 78148831 (+) |
| G1327351 | NA | non-coding | upstream | 12352 | 76762501 ~ 76762786 (+) |
| G1327349 | NA | non-coding | upstream | 12965 | 76761629 ~ 76762173 (+) |
| G1327343 | NA | non-coding | upstream | 24404 | 76750498 ~ 76750734 (+) |
| G1327342 | NA | non-coding | upstream | 24792 | 76750029 ~ 76750346 (+) |
| G1327340 | NA | non-coding | upstream | 25446 | 76749456 ~ 76749692 (+) |
| G1327385 | NA | non-coding | downstream | 21943 | 76820711 ~ 76820924 (+) |
| G1327390 | NA | non-coding | downstream | 38770 | 76837538 ~ 76837749 (+) |
| G1327399 | NA | non-coding | downstream | 61804 | 76860572 ~ 76861923 (+) |
| G1327401 | NA | non-coding | downstream | 67581 | 76866349 ~ 76867100 (+) |
| G1327402 | NA | non-coding | downstream | 72728 | 76871496 ~ 76873320 (+) |
| G1327230 | NA | other | upstream | 185253 | 76587574 ~ 76589885 (+) |
| G1326605 | NA | other | upstream | 889991 | 75884811 ~ 75885147 (+) |
| G1326586 | NA | other | upstream | 968619 | 75805999 ~ 75806519 (+) |
| G1326503 | cand1 | other | upstream | 1176623 | 75593591 ~ 75598515 (+) |
| G1326467 | NA | other | upstream | 1248121 | 75522869 ~ 75527017 (+) |
| G1327379 | NA | other | downstream | 11092 | 76809860 ~ 76813288 (+) |
| G1328201 | NA | other | downstream | 1271261 | 78070029 ~ 78070403 (+) |
| LOC118936267 | mrps33 | other | downstream | 1950610 | 78749330 ~ 78763988 (+) |
| LOC118938871 | braf | other | downstream | 1981563 | 78780201 ~ 78826735 (+) |
