XLOC_032239 (zgc:112163)


Basic Information

Item Value
gene id XLOC_032239
gene name zgc:112163
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40874206 ~ 40875253 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062967
ATTCGATGAAAGGTATCGTTCAGTAACACTACTTTGGAGTagacatatgctagataagtgttaactatttttaataacaaatgtGTATGTTCTGCTGTCAACAAACATCTCGTTTCGACTTAAATGACTCACTTGGAAAGAGGCGCAATGGTCGCCTCCTCGCCCGAAACGCTGATCTCAGCCGCACAGAAGTGTTTGTGTTCTCGTAAGAAACGTTTATCTCCGTCCTCGTGCCTAGAAGTGACTATTCATATAATAGCCGTGGATCTTGGCGTCAAACCTGCGCTGCTGTACGACAGTAACGGAGCATCTCCAGACCAGCTTCAACTTTACCTCCATTCATTGCAGGAGTCTAGTGTTGTAAGCAATTCACTGCGGATAATGTCCATTAATgacaacacattcatcattaacCCTGACATCATGAAGTCTCACCTGGGTGAACTGCTTAAAAGCAAGAGTCTACCCCTGATTGATGTGTGTTCTTCCAGAAAACGCCCAGTCTTGTGTGCATTTGAGAGAAGTGCTGAGGAGATGGTCAGAAGTTTTTTGGAAGTCTTCATGAATGGTCTGGACTTGGTTGTGTTGGAAGAGGAGTTGTATAAAGACTGGAACTTGTGCACTTTTTTTGGGATCTTGTTAGGTTATCCTGCGTCCTATTGGTTTGAACAAACTCAGGGATTTGAGAACTGTCTGTCTATGACACCCCTGGTAGTGTGCACGGTTTGGGTCAGGTGGCAGATACATGAGATAAAGCAGCGCTGTTGTCTTTACTCCTTCAGTGTCCCAGAAGAGCTGTGGTCAGATGTGCAGAGCCATATACAGCGCTGGACTGATCATCTGAGAGAGAGATTCAGCAAACAGACTGTTCTGACTGACATCTGCTTTTCTAGGGACACCGTCACTTTGCCCTCTGTGACTCTTTGAATAAACTTTGTTTAACTGGTATTATTTTGCCAGTGTCACACATTTTAACAATGTATCTTCTGAGAATTGGATTACATAGGGTTTATTTGtgttgttaataaaacatttttgactcCAAGAA

Function

symbol description
zgc:112163 Orthologous to human C1orf74 (chromosome 1 open reading frame 74).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-227 Orthologous to human C1orf74 (chromosome 1 open reading frame 74).

Ensembl:

ensembl_id ENSDARG00000017657

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062967 True 1048 mRNA 0.43 1 40874206 40875253

Neighbor

gene id symbol gene type direction distance location
XLOC_032238 ruvbl1 coding upstream 33174 40832635 ~ 40841032 (+)
XLOC_032237 gata2b coding upstream 70406 40794015 ~ 40803800 (+)
XLOC_032236 si:ch211-157b11.8 coding upstream 90565 40775800 ~ 40783641 (+)
XLOC_032235 slc26a6l coding upstream 141514 40723554 ~ 40732692 (+)
XLOC_032234 ccdc36 coding upstream 157158 40714811 ~ 40717048 (+)
XLOC_032240 eif4enif1 coding downstream 47319 40922572 ~ 40947671 (+)
XLOC_032241 patz1 coding downstream 75974 40951227 ~ 40968320 (+)
XLOC_032242 NA coding downstream 109344 40984597 ~ 40986135 (+)
XLOC_032243 tgfa coding downstream 117156 40992409 ~ 41009381 (+)
XLOC_032244 entpd8 coding downstream 163504 41038757 ~ 41060423 (+)
XLOC_032231 NA non-coding upstream 218160 40652905 ~ 40656046 (+)
XLOC_032225 NA non-coding upstream 322214 40545858 ~ 40551992 (+)
XLOC_032222 CU463231.2 non-coding upstream 392429 40475711 ~ 40481777 (+)
XLOC_032220 BX936393.2 non-coding upstream 422366 40448634 ~ 40451840 (+)
XLOC_032217 CU467879.1 non-coding upstream 824761 40043615 ~ 40049445 (+)
XLOC_032245 NA non-coding downstream 205257 41080510 ~ 41082985 (+)
XLOC_032251 AL732567.2 non-coding downstream 319434 41194687 ~ 41194801 (+)
XLOC_032256 dre-let-7j non-coding downstream 579538 41454791 ~ 41454873 (+)
XLOC_032260 NA non-coding downstream 890385 41765638 ~ 41773554 (+)

Expression


Co-expression Network