XLOC_032242


Basic Information

Item Value
gene id XLOC_032242
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40984597 ~ 40986135 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064921
TCATTACCGCACAGCTGCATGGCACTGCTCAAGACGGCCACCGAGATCAGCTGCCAGCGGACGCTGCGGTCAGTCAACAGATCCCACGGCTGCTTGGCACGATCGCTTTTGATTTCATTCTGTTCCTGCAGAAGCTCATCCAGCTCTTCTCTCCGCACCTCACAGCCTCGCAGACGCTTCAGTGCTAtgaaagacAGGCCTCCTTGTCTTTACAGTCAAAAAGGAGGTAACGGGGACTCTCTGGGAACCAGGGCAAGGTGAGGAGCTGGATGAAGCCTGGGATGGCATTACTTGCCAATAAGTACTGCCAATATGGCTCACTACCCAACAACTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064921 True 334 lncRNA 0.54 2 40984597 40986135

Neighbor

gene id symbol gene type direction distance location
XLOC_032241 patz1 coding upstream 16277 40951227 ~ 40968320 (+)
XLOC_032240 eif4enif1 coding upstream 36926 40922572 ~ 40947671 (+)
XLOC_032239 zgc:112163 coding upstream 109344 40874206 ~ 40875253 (+)
XLOC_032238 ruvbl1 coding upstream 143565 40832635 ~ 40841032 (+)
XLOC_032237 gata2b coding upstream 180797 40794015 ~ 40803800 (+)
XLOC_032243 tgfa coding downstream 6274 40992409 ~ 41009381 (+)
XLOC_032244 entpd8 coding downstream 52622 41038757 ~ 41060423 (+)
XLOC_032245 NA coding downstream 94375 41080510 ~ 41082985 (+)
XLOC_032246 fkbp5 coding downstream 109923 41096058 ~ 41117242 (+)
XLOC_032247 slc6a22.2 coding downstream 158020 41144155 ~ 41161017 (+)
XLOC_032231 NA non-coding upstream 328551 40652905 ~ 40656046 (+)
XLOC_032225 NA non-coding upstream 432605 40545858 ~ 40551992 (+)
XLOC_032222 CU463231.2 non-coding upstream 502820 40475711 ~ 40481777 (+)
XLOC_032220 BX936393.2 non-coding upstream 532757 40448634 ~ 40451840 (+)
XLOC_032217 CU467879.1 non-coding upstream 935152 40043615 ~ 40049445 (+)
XLOC_032251 AL732567.2 non-coding downstream 208552 41194687 ~ 41194801 (+)
XLOC_032256 dre-let-7j non-coding downstream 468656 41454791 ~ 41454873 (+)
XLOC_032260 NA non-coding downstream 779503 41765638 ~ 41773554 (+)
XLOC_032261 NA non-coding downstream 793014 41779149 ~ 41788414 (+)

Expression


Co-expression Network