G1327862


Basic Information

Item Value
gene id G1327862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77527194 ~ 77527410 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1516752
GCTCACTGAGCATCTTTCAGCTCTACGTCACAACGTGAGAAAGAGTAGCCATGGTGGCTTGACAGTGAGTAGTTTGCCACAGCCAGCGACAGCATATTTGAATAAGTAAATAAAGTACACTTTCACCAAGTAAGCAGCCCTGTCCTCATCACATCTTTCACTTCGTTAACGTTAGTTAGGCTTGTAGCTAGCCAGCACGTTAGTTAGGCTTGTAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1516752 True 217 lncRNA 0.45 1 77527194 77527410

Neighbor

gene id symbol gene type direction distance location
LOC118938862 NA coding upstream 108988 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1056377 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2155131 75366958 ~ 75372063 (+)
LOC110499731 dyrk2 coding upstream 2161005 75332550 ~ 75366189 (+)
LOC118938859 LOC106593189 coding upstream 2254587 75251801 ~ 75272607 (+)
LOC118938903 NA coding downstream 283431 77810841 ~ 77812644 (+)
LOC110490691 arhgef39 coding downstream 431561 77958971 ~ 78066964 (+)
rergla LOC106609822 coding downstream 568121 78095531 ~ 78107017 (+)
il17r il17r coding downstream 595672 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 698464 78225874 ~ 78277603 (+)
G1327860 NA non-coding upstream 1551 77524917 ~ 77525643 (+)
G1327859 NA non-coding upstream 4407 77519259 ~ 77522787 (+)
G1327849 NA non-coding upstream 8198 77517404 ~ 77518996 (+)
G1327858 NA non-coding upstream 11017 77515903 ~ 77516177 (+)
G1327857 NA non-coding upstream 11313 77515296 ~ 77515881 (+)
G1327863 NA non-coding downstream 1032 77528442 ~ 77530779 (+)
G1327864 NA non-coding downstream 3649 77531059 ~ 77531454 (+)
G1327877 NA non-coding downstream 47788 77575198 ~ 77575812 (+)
G1327880 NA non-coding downstream 54623 77582033 ~ 77584067 (+)
G1327884 NA non-coding downstream 64307 77591717 ~ 77597950 (+)
G1327379 NA other upstream 713906 76809860 ~ 76813288 (+)
G1327230 NA other upstream 937309 76587574 ~ 76589885 (+)
G1326605 NA other upstream 1642047 75884811 ~ 75885147 (+)
G1326586 NA other upstream 1720675 75805999 ~ 75806519 (+)
G1326503 cand1 other upstream 1928679 75593591 ~ 75598515 (+)
G1328201 NA other downstream 542619 78070029 ~ 78070403 (+)
LOC118936267 mrps33 other downstream 1221968 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 1252921 78780201 ~ 78826735 (+)
G1328968 NA other downstream 1511194 79038604 ~ 79039457 (+)

Expression


Co-expression Network