G1327966


Basic Information

Item Value
gene id G1327966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77627334 ~ 77627740 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1516888
CTTTGTTTTAGATACCAGCATTATGAAACCTCTACTACAATACATTTGTTTGACTTGGGGAAAAATCTGTCACTTTTTAcaatgtggtttcttccttcccagactccatgaaatgatgacctcttcttaaatatttggtcaaattatacattgtgtgtatggtttcctagaaacaagggtggctcaacttacccctttggtTCAATTGacccctttggctcaatttacccctttggctcaatttacccctttggttcaatttacccctttggctcaatttacccctttggctcaatttacccctttggttcaatttac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106530092 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1516888 True 318 lncRNA 0.38 2 77627334 77627740

Neighbor

gene id symbol gene type direction distance location
LOC118938862 NA coding upstream 209128 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1156517 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2255271 75366958 ~ 75372063 (+)
LOC110499731 dyrk2 coding upstream 2261145 75332550 ~ 75366189 (+)
LOC118938859 LOC106593189 coding upstream 2354727 75251801 ~ 75272607 (+)
LOC118938903 NA coding downstream 183101 77810841 ~ 77812644 (+)
LOC110490691 arhgef39 coding downstream 331231 77958971 ~ 78066964 (+)
rergla LOC106609822 coding downstream 467791 78095531 ~ 78107017 (+)
il17r il17r coding downstream 495342 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 598134 78225874 ~ 78277603 (+)
G1327961 NA non-coding upstream 2276 77624833 ~ 77625058 (+)
G1327960 NA non-coding upstream 3414 77623671 ~ 77623920 (+)
G1327891 NA non-coding upstream 15835 77611165 ~ 77611499 (+)
G1327884 NA non-coding upstream 29384 77591717 ~ 77597950 (+)
G1327880 NA non-coding upstream 43267 77582033 ~ 77584067 (+)
G1327994 NA non-coding downstream 22611 77650351 ~ 77650575 (+)
G1328004 NA non-coding downstream 33779 77661519 ~ 77661790 (+)
G1328009 LOC106609731 non-coding downstream 48802 77676542 ~ 77678352 (+)
G1328024 NA non-coding downstream 96423 77724163 ~ 77725940 (+)
G1328033 NA non-coding downstream 132642 77760382 ~ 77760894 (+)
G1327379 NA other upstream 814046 76809860 ~ 76813288 (+)
G1327230 NA other upstream 1037449 76587574 ~ 76589885 (+)
G1326605 NA other upstream 1742187 75884811 ~ 75885147 (+)
G1326586 NA other upstream 1820815 75805999 ~ 75806519 (+)
G1326503 cand1 other upstream 2028819 75593591 ~ 75598515 (+)
G1328201 NA other downstream 442289 78070029 ~ 78070403 (+)
LOC118936267 mrps33 other downstream 1121638 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 1152591 78780201 ~ 78826735 (+)
G1328968 NA other downstream 1410864 79038604 ~ 79039457 (+)

Expression


Co-expression Network