G1327994


Basic Information

Item Value
gene id G1327994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77650351 ~ 77650575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1516916
GTTCCTATTTCATCagggctatagaccagggcctaaACCAACACTGCATGCCACTCAGTCAAACCAAACTGTTCCTATTTCATGAGGGCTATAGACCCGGGCCTAAACCAACACTGCATGCCACTCAGTCAAACCAAACTGTTCCTATTTCATCAGGGCTATAGACCCGGGCCTAAACCAACACTGCAACTCAGTCAAACCAAACTGTTCCTATTTCATGAGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1516916 True 225 lncRNA 0.48 1 77650351 77650575

Neighbor

gene id symbol gene type direction distance location
LOC118938862 NA coding upstream 232145 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1179534 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2278288 75366958 ~ 75372063 (+)
LOC110499731 dyrk2 coding upstream 2284162 75332550 ~ 75366189 (+)
LOC118938859 LOC106593189 coding upstream 2377744 75251801 ~ 75272607 (+)
LOC118938903 NA coding downstream 160266 77810841 ~ 77812644 (+)
LOC110490691 arhgef39 coding downstream 308396 77958971 ~ 78066964 (+)
rergla LOC106609822 coding downstream 444956 78095531 ~ 78107017 (+)
il17r il17r coding downstream 472507 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 575299 78225874 ~ 78277603 (+)
G1327966 NA non-coding upstream 22611 77627334 ~ 77627740 (+)
G1327961 NA non-coding upstream 25293 77624833 ~ 77625058 (+)
G1327960 NA non-coding upstream 26431 77623671 ~ 77623920 (+)
G1327891 NA non-coding upstream 38852 77611165 ~ 77611499 (+)
G1327884 NA non-coding upstream 52401 77591717 ~ 77597950 (+)
G1328004 NA non-coding downstream 10944 77661519 ~ 77661790 (+)
G1328009 LOC106609731 non-coding downstream 25967 77676542 ~ 77678352 (+)
G1328024 NA non-coding downstream 73588 77724163 ~ 77725940 (+)
G1328033 NA non-coding downstream 109807 77760382 ~ 77760894 (+)
G1328086 NA non-coding downstream 157427 77808002 ~ 77808273 (+)
G1327379 NA other upstream 837063 76809860 ~ 76813288 (+)
G1327230 NA other upstream 1060466 76587574 ~ 76589885 (+)
G1326605 NA other upstream 1765204 75884811 ~ 75885147 (+)
G1326586 NA other upstream 1843832 75805999 ~ 75806519 (+)
G1326503 cand1 other upstream 2051836 75593591 ~ 75598515 (+)
G1328201 NA other downstream 419454 78070029 ~ 78070403 (+)
LOC118936267 mrps33 other downstream 1098803 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 1129756 78780201 ~ 78826735 (+)
G1328968 NA other downstream 1388029 79038604 ~ 79039457 (+)

Expression


Co-expression Network