XLOC_032246 (fkbp5)


Basic Information

Item Value
gene id XLOC_032246
gene name fkbp5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 41096058 ~ 41117242 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062979
TATTGGTGTGGAGAAGTGTAAAATACTGCCGGTAGAACATCTAGTACTCTCGCGGTGCTGAGAGGGCGGGCTCATTCCCCTTTAAGCCGCTACGCACAGGTTGTATTCGCCGGTGAGACTAAACAGAAGTTGTATACGGACGGATAAATGGTCAAACACATGAGAGGAAACAACAACCAAAGGAATATTTTGGGAACAAGGGCATGTATGAGTGGTGAGATGTCATCATTAGAGGATATCTTTTCCACGAACCAGTGCCCGACTGCTGTCTTTACCTCCCGAGGCACTGCTGTCACTCCAAACGGTGACAGTGGAGTATGCAAGATTGTGAAACAGCATGGTGTAGAGGGGGAAAGGCCGATGATCGGGGACAGGGTGTTCGTCCACTACACCGGCAGACTCCTCAGTGGAAAGAAGTTTGACTCCAGTCTAGACCGCAAGGAGCCTTTTGTTTTCAATGTGGGGAAAGGTCAGGTCATCAAGGCGTGGGACATCTGTGTGTGTTCCATGCAGAAAGGAGAGGTGTGTTTGATGCTCTGCAAGCCTGAATATGCATACGGTTCTGCTGGCAGCCCCCCAAAAGTCCCTCCTAATTCCACACTCGTGTTCGAGATCGAGCTCCTGAACTTCCGAGGGGAGGAGCTTACAGAAGATGGTGGGATCGTGAGGAGAATAAAGGTCAAAGGTGAAGGCTACAGCAATCCAAATGAAGGCGCCACTGTCCACGTGCACTTGGAGGGCTGGTGCGGAGGTCGACTGTTTGATTCGCGGGATGTCACCTTTGCGGTGGGAGAATCAGAGGACGTGGGTGTTCCTTTAGGAGTGGACCGAGCCATGGAAAAACTCCAAAAGGGGGAATGCTGTTTATTATACCTAAAGCCCAAGTACGCCTTTGGCAAAGAGGGCAGAAAAGAACATGACATCGGATCAAATGCAGAACTACTATATGAAGTGACACTGAAAGACTTTGAAAAGGCCAAAGAAACATGGGAAATGGACCTCAAAGAGAAACTGGAACGTGCTGTTTTAGTCAAACAAAAAGGGACACAGTATTTCAAGGCAGGACGATACAACTATGCTGTAATTCAGTACCAGCGGATCGTAAACTGGTTGGAGATGGAGTGCGGCAATGGAAAGGAGCAGCTCCAAGCCATCCAGGCTCTTCTCTTAGTGGCGCATCTGAATCTGGCCCTGTGTTACCTGCGGCTGCGCGAATACTCTCAAACAGTGGAGAACTGCAACAAGGTAATGGAGCTGGACCCTGAAAATGAGAAAGCTCTGTATCGGCGGGGCGAAGCGCGTCTGTTACGCAACGAGTTCAGCCTGGCACTGATGGACTTCAAGCAAGTTTTGCAAGTCAACTCCTTCAACCGCGCAGCCCGCAGCCAAATCCTCATCTGCCAGCACAAGATTCGTGAGCACCATGAGCGGGACAAGAAAATCTATGCAAACATGTTCCAGAGGTTTGCTGAACACGATGCTAAGGTGTGTCGATTGAAACGCAAAAAAGAAGAGAGCGTTATTTCCGATCAGAATAAGCAGGGTCTAAAGAGAGCTCGGCTCAGTCAGGACGGCTCCTAAAACTCCTCATCTGACTCTGGAGGCGCGAGACTGTGGGAATGGCCGGCCCGTTCTCGACTTGAGTCATGACAGGGGGACATGGGTAGAGGCATGGACGTGCCCTCCTTTTACACCCTGACCTCATCATCTCTCGGACAAACTCTGGGAAAGATCCTAATAAAGGTTCACGGACATGGAGGAGCTGCAAACCTTAAAGACATTCCTACCAACAACAGAAAAACCAAAGCGCACAATTCTGTGACCACCTGTAAAAGCTCTATGCTGCACGCTTCAGCTCTCCGACTGGCATTCATCCGCTGCATTAATCGATGGCGAAAGCTAAAGGTTTAATGTTATATCGCATAACAGACTTGAATACAGCTGTGTACCCTTATCATGTACTGTACAGTATTCAGTCTCCACTTTGTGCAAATTAGGAGTTCAAGTTTGAGTCGTGTACTGAAGGCTtgacgttttattattattattattatttttttgtatgataTTTTTGTTTAAGCGATATTTAGATGAGCATAGTGAGTAGCTGGACCTAAAAGTGCAATCGTCCCTTTGGGGAAAAAACAGAAACTATTTGCGAATCTCCCAGCTGTGTTTATCATGGAGTCGCAGCAGGCCCACGTTCACAAACACACTGCTTTTTATTCATTTGATACTTTTGAGAGACTTGTGCATGCTTATTTACTGCAAACCTGGGATCGTCCTACAATTCGGGACCAGTTAGTTTCAACCTGCAAACCCTGGTAGATTTACTTGACTGAAGTtctatattttttccatttcagTGCAGATGCTTTTTAGACAGATCTTTTGATGAGATAGGAATATTTCAACTGTTCTTTTCAGACCCGCTTGTTCGTTTGATCAAATACTAACTAgtgttgtttgcatgttttcagtATGTTTCCCATGTTTTagacagttttaataataataataataaaaaaaactgtttgttaACTTTTTCTGTTTACAGTTTGATGCATTACAGCAGGCCtgtcaataaatatatatatatatatatataaacta
>TCONS_00062980
AGACTAAACAGAAGTTGTATACGGACGGATAAATGGTCAAACACATGAGAGGAAACAACAACCAAAGGAATATTTTGGGAACAAGGGCATGTATGAGTGGTGAGATGTCATCATTAGAGGATATCTTTTCCACGAACCAGTGCCCGACTGCTGTCTTTACCTCCCGAGGCACTGCTGTCACTCCAAACGGTGACAGTGGAGTATGCAAGATTGTGAAACAGCATGGTGTAGAGGGGGAAAGGCCGATGATCGGGGACAGGGTGTTCGTCCACTACACCGGCAGACTCCTCAGTGGAAAGAAGTTTGACTCCAGTCTAGACCGCAAGGAGCCTTTTGTTTTCAATGTGGGGAAAGGTAATAGATTCCATAGATTTATCTCTCATTTACCAATTTAAGATGTTATTACTGAAACCATTTTGCAAGAGAGACGTCCAGTGTGACGAATGCATAAGCAGACAAATGATTCTGTGTGCTATGTTGTTATACACATTTTTCTAATTCATTAATCATTATACGGCCAACTGTGTGGTGTGCCGTTATTTGGCTCAACTTGTGGACGTTGGTTTCACATATTTGGTTTTGATGGATTTGCAAAACCTTACTTTAATCTGCCAAATCAAATACCCGGTGTAGAAATAAATGGAACGGAAATGAGCATACCCTAATAAAATTAGACAGTCATCATGTTAACTCTCTTGTGGTTAAATGCTATCTGGCTAAATGGTATCTGGCAATACCACAGTAATGGCTTATTGAGTAAAGCAACATGCATCATATTTTTTTCTGCCTATTAACATCCTACGCAAAACTCCACTCTTCACCACATGTGAGAAACGCTGATAAATATCAACAGAAAAGAACATTAAACTAAAAAACTTAGAGTCAATATTTAGCCAGTGCAAAGCTTGCTTGGAACT
>TCONS_00062981
ATGTTGTATGCTTGTTTTTATAGGGGAACAAGGGCATGTATGAGTGGTGAGATGTCATCATTAGAGGATATCTTTTCCACGAACCAGTGCCCGACTGCTGTCTTTACCTCCCGAGGCACTGCTGTCACTCCAAACGGTGACAGTGGAGTATGCAAGATTGTGAAACAGCATGGTGTAGAGGGGGAAAGGCCGATGATCGGGGACAGGGTGTTCGTCCACTACACCGGCAGACTCCTCAGTGGAAAGAAGTTTGACTCCAGTCTAGACCGCAAGGAGCCTTTTGTTTTCAATGTGGGGAAAGGTCAGGTCATCAAGGCGTGGGACATCTGTGTGTGTTCCATGCAGAAAGGAGAGGTGTGTTTGATGCTCTGCAAGCCTGAATATGCATACGGTTCTGCTGGCAGCCCCCCAAAAGTCCCTCCTAATTCCACACTCGTGTTCGAGATCGAGCTCCTGAACTTCCGAGGGGAGGAGCTTACAGAAGATGGTGGGATCGTGAGGAGAATAAAGGTCAAAGGTGAAGGCTACAGCAATCCAAATGAAGGCGCCACTGTCCACGTGCACTTGGAGGGCTGGTGCGGAGGTCGACTGTTTGATTCGCGGGATGTCACCTTTGCGGTGGGAGAATCAGAGGACGTGGGTGTTCCTTTAGGAGTGGACCGAGCCATGGAAAAACTCCAAAAGGGGGAATGCTGTTTATTATACCTAAAGCCCAAGTACGCCTTTGGCAAAGAGGGCAGAAAAGAACATGACATCGGATCAAATGCAGAACTACTATATGAAGTGACACTGAAAGACTTTGAAAAGGCCAAAGAAACATGGGAAATGGACCTCAAAGAGAAACTGGAACGTGCTGTTTTAGTCAAACAAAAAGGGACACAGTATTTCAAGGCAGGACGATACAACTATGCTGTAATTCAGTACCAGCGGATCGTAAACTGGTTGGAGATGGAGTGCGGCAATGGAAAGGAGCAGCTCCAAGCCATCCAGGCTCTTCTCTTAGTGGCGCATCTGAATCTGGCCCTGTGTTACCTGCGGCTGCGCGAATACTCTCAAACAGTGGAGAACTGCAACAAGGTAATGGAGCTGGACCCTGAAAATGAGAAAGCTCTGTATCGGCGGGGCGAAGCGCGTCTGTTACGCAACGAGTTCAGCCTGGCACTGATGGACTTCAAGCAAGTTTTGCAAGTCAACTCCTTCAACCGCGCAGCCCGCAGCCAAATCCTCATCTGCCAGCACAAGATTCGTGAGCACCATGAGCGGGACAAGAAAATCTATGCAAACATGTTCCAGAGGTTTGCTGAACACGATGCTAAGGTGTGTCGATTGAAACGCAAAAAAGAAGAGAGCGTTATTTCCGATCAGAATAAGCAGGGTCTAAAGAGAGCTCGGCTCAGTCAGGACGGCTCCTAAAACTCCTCATCTGACTCTGGAGGCGCGAGACTGTGGGAATGGCCGGCCCGTTCTCGACTTGAGTCATGACAGGGGGACATGGGTAGAGGCATGGACGTGCCCTCCTTTTACACCCTGACCTCATCATCTCTCGGACAAACTCTGGGAAAGATCCTAATAAAGGTTCACGGACATGGAGGAGCTGCAAACCTTAAAGACATTCCTACCAACAACAGAAAAACCAAAGCGCACAATTCTGTGACCACCTGTAAAAGCTCTATGCTGCACGCTTCAGCTCTCCGACTGGCATTCATCCGCTGCATTAATCGATGGCGAAAGCTAAAGGTTTAATGTTATATCGCATAACAGACTTGAATACAGCTGTGTACCCTTATCATGTACTGTACAGTATTCAGTCTCCACTTTGTGCAAATTAGGAGTTCAAGTTTGAGTCGTGTACTGAAGGCTtgacgttttattattattattattatttttttgtatgataTTTTTGTTTAAGCGATATTTAGATGAGCATAGTGAGTAGCTGGACCTAAAAGTGCAATCGTCCCTTTGGGGAAAAAACAGAAACTATTTGCGAATCTCCCAGCTGTGTTTATCATGGAGTCGCAGCAGGCCCACGTTCACAAACACACTGCTTTTTATTCATTTGATACTTTTGAGAGACTTGTGCATGCTTATTTACTGCAAACCTGGGATCGTCCTACAATTCGGGACCAGTTAGTTTCAACCTGCAAACCCTGGTAGATTTACTTGACTGAAGTtctatattttttccatttcagTGCAGATGCTTTTTAGACAGATCTTTTGATGAGATAGGAATATTTCAACTGTTCTTTTCAGACCCGCTTGTTCGTTTGATCAAATACTAACTAgtgttgtttgcatgttttcagtATGTTTCCCATGTTTTagacagttttaataataataataataaaaaaaactgtttgttaACTTTTTCTGTTTACAGTTTGATGCATTACAGCAGGCCtgtcaataaatatatatatatatatatataaactattcaGTGTTGTGTGTGTCATTGGTGTAGTGAATTTACttgcatatacagtacagttgaagtcagaaatattagccattctgaattattagcttcctgtatattttttccccagcacatttctagacataataatTTGTTCTGGGGCGTcctggtggctcagtgggtagcacgatcgcctcacagcaagaaggttgctggttcgagccccagccagctcagttggcatttctgtgtgaagtttgtatgttcttccccagtttgagtgggtttcctctgggtgctctggtttaccccacattccaaagacatgcgctataggtgaattgagaaagctaaattgtccgtgtatatgggtgtttcccagttttgggttgcagctggataagtCCCCCGCACTttgagacagaccatttagaaacaggtgattaagaaTGTAAACCTTTGGATTTCATAcagcaaccccccccccccccccccccccaactaatttttaaagaaatcagaccttaaacgtggtAATTTTATGATGGAAATACTGAAAGCGCTGAGGCAGATGGCTGAAATGAATAGTCTGTGTGCATGCATATAGCCCACTGTTATTGAActacaatgttatttttattcattcattttccttcagcttggtccctttattcatcaggggtcgtcacattggaatgaaccgccaacttatccagcatatgttttacacgtgctggggatgctcttccagctgcaaccatggaaaacacactcattcacactcatacactgcggccaaattagtttttcaattcacctatagcacatgtctttggacttgtggggaaaaccgtagcacctggaggaaaccttcgccaacacggggagaacatgcagactacaaacagaaatgtcaactgaaccagccgggactcaaagcagcgaccttcttgctgtgagacgtgctaaccactgagccaccatgtcgccctcatgttattttttttaaaacttattttaatagaaTAAAATCATCCTTGAtcattatgatttaaaaaaaaataaaaataaacacattttaaataattcttACCACAAATAGGCTATTTGAACAGCAGTGTTATAGTTAACTTGTCAGTGGGCCCACACGGCATCTGCacatgcagaaatccgcagatttccacagatttttagcccatcgttgag

Function

symbol description
fkbp5 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Is expressed in gut; head; and regenerating fin. Human ortholog(s) of this gene implicated in major depressive disorder. Orthologous to human FKBP5 (FKBP prolyl isomerase 5).

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0061077 chaperone-mediated protein folding biological_process
GO:0005737 cytoplasm cellular_component
GO:0005528 FK506 binding molecular_function
GO:0031072 heat shock protein binding molecular_function
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030616-630 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Is expressed in gut; head; and regenerating fin. Human ortholog(s) of this gene implicated in major depressive disorder. Orthologous to human FKBP5 (FKBP prolyl isomerase 5).

Ensembl:

ensembl_id ENSDARG00000028396

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062979 False 2613 mRNA 0.46 11 41096058 41116053
TCONS_00062980 False 917 lncRNA 0.40 3 41096173 41102304
TCONS_00062981 True 3634 mRNA 0.44 10 41099787 41117242

Neighbor

gene id symbol gene type direction distance location
XLOC_032245 NA coding upstream 13073 41080510 ~ 41082985 (+)
XLOC_032244 entpd8 coding upstream 35635 41038757 ~ 41060423 (+)
XLOC_032243 tgfa coding upstream 86677 40992409 ~ 41009381 (+)
XLOC_032242 NA coding upstream 109923 40984597 ~ 40986135 (+)
XLOC_032241 patz1 coding upstream 127738 40951227 ~ 40968320 (+)
XLOC_032247 slc6a22.2 coding downstream 26913 41144155 ~ 41161017 (+)
XLOC_032248 opn1mw1 coding downstream 64627 41181869 ~ 41183823 (+)
XLOC_032249 opn1mw2 coding downstream 69078 41186320 ~ 41189460 (+)
XLOC_032250 opn1mw3 coding downstream 74240 41191482 ~ 41193419 (+)
XLOC_032251 AL732567.2 coding downstream 77445 41194687 ~ 41194801 (+)
XLOC_032231 NA non-coding upstream 440012 40652905 ~ 40656046 (+)
XLOC_032225 NA non-coding upstream 544066 40545858 ~ 40551992 (+)
XLOC_032222 CU463231.2 non-coding upstream 614281 40475711 ~ 40481777 (+)
XLOC_032256 dre-let-7j non-coding downstream 337549 41454791 ~ 41454873 (+)
XLOC_032260 NA non-coding downstream 648396 41765638 ~ 41773554 (+)
XLOC_032261 NA non-coding downstream 661907 41779149 ~ 41788414 (+)
XLOC_032263 NA non-coding downstream 779142 41896384 ~ 41915013 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_10038089_10047331 FKBP5 coding CI01000340 null 10038033 ~ 10048382 (+)