G1328045



Basic Information


Item Value
gene id G1328045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77674209 ~ 77674727 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1516978
gcgagggagagaagaggaggggagagagaggagaagagagaaacagagggagaggagagaaagagagaggagaggagaggagggaagagaaagcgagggagagggagagaggaagattcTTATTCATGTGTTTTAGAGGTCAGAATGAAAACCTGTGGTAATGATGTGTATTGCTCCCCCACTGCGCTGGGGCAGGACAGAGACGTCTTGTGTTCTGCCTCTTTGTTCTTTGGCCAGGCATAGCGGCagcatagcagcagcagggtgTTAACCTGGATAGAGGTATCAAGTGGCCAAGTCACCGCCTTCCAGGACTGAACCCTTTCCAAGGAGCTGGATCGCTCGTGAAATGAAATATCACCGGGACGAGGGTCAGGTCAGAGCGGCCCGCGTTCTAGTTCACCCCTTTCCTCCGTTCCTCGTTCTGTTGTCTTCTTCTACTTACTTCCTCTTGCTTTTTGGTAGACGCAACCGACTACTAATGCCAAACATCAGTGGCCTCTCCAGACAAATACTTGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1516978 True 519 lncRNA 0.52 1 77674209 77674727

Neighbor


gene id symbol gene type direction distance location
LOC110490866 NA coding downstream 347 77672463 ~ 77673862 (-)
LOC110511982 tmem19 coding downstream 64723 77583866 ~ 77609486 (-)
LOC110499734 LOC106609838 coding downstream 68188 77601746 ~ 77606021 (-)
trnak-cuu-19 NA coding downstream 75885 77587377 ~ 77598491 (-)
trnak-cuu-18 NA coding downstream 78322 77595815 ~ 77595887 (-)
LOC110490687 LOC105023115 coding upstream 718 77675445 ~ 77794866 (-)
LOC118938863 NA coding upstream 349716 78024443 ~ 78024930 (-)
LOC118938864 LOC106576660 coding upstream 474246 78148973 ~ 78157083 (-)
LOC118938865 mkrn1 coding upstream 485064 78159791 ~ 78194251 (-)
LOC118938867 LOC106576670 coding upstream 624605 78298576 ~ 78452504 (-)
G1327991 NA non-coding downstream 25234 77648745 ~ 77648975 (-)
G1327989 NA non-coding downstream 25575 77648404 ~ 77648634 (-)
G1327985 NA non-coding downstream 28003 77645944 ~ 77646206 (-)
G1327977 NA non-coding downstream 34348 77639465 ~ 77639861 (-)
G1328073 NA non-coding upstream 105704 77780431 ~ 77781694 (-)
G1328089 NA non-coding upstream 138294 77813021 ~ 77813310 (-)
G1328091 NA non-coding upstream 146037 77820764 ~ 77821245 (-)
G1328097 NA non-coding upstream 155794 77830521 ~ 77831099 (-)
LOC110515635 LOC106576658 other downstream 167435 77418263 ~ 77506802 (-)
G1326996 NA other downstream 1675209 75998506 ~ 75999000 (-)
G1326164 NA other downstream 2620852 75052749 ~ 75053357 (-)
G1326095 NA other downstream 2900256 74772299 ~ 74773953 (-)
G1326070 NA other downstream 2950809 74722589 ~ 74723400 (-)
G1328123 NA other upstream 196552 77871279 ~ 77874604 (-)
G1328815 NA other upstream 1088372 78763099 ~ 78766048 (-)
G1328861 NA other upstream 1195598 78870325 ~ 78871031 (-)
G1328892 NA other upstream 1251187 78925914 ~ 78926137 (-)

Expression



Co-expression Network