G1328138


Basic Information

Item Value
gene id G1328138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77899337 ~ 77899748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517091
tctctattaactagacactatctctattaactagacactatctctattaactagacactatctccattaactagacactatctctattaactagacactatctctattaactagacactatctctattaactagacactatctctattgttATTACATGGACACTATctatattaactagacactatctctattaactagacactatctctgttaactagacactatctatattaactagacactatctctattaactagacactatctctattgttATTACATGGACACTATCTATATTAACtaaacactatctctattaactagacactatctctattaactagacactatctctattaactagacactatctctattaactagacactatctctattgttATTACATGG

Function

NR:

description
PREDICTED: SH3 domain-containing protein C23A1.17-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517091 True 412 lncRNA 0.30 1 77899337 77899748

Neighbor

gene id symbol gene type direction distance location
LOC118938903 NA coding upstream 86693 77810841 ~ 77812644 (+)
LOC118938862 NA coding upstream 481131 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1428520 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2527274 75366958 ~ 75372063 (+)
LOC110499731 dyrk2 coding upstream 2533148 75332550 ~ 75366189 (+)
LOC110490691 arhgef39 coding downstream 59223 77958971 ~ 78066964 (+)
rergla LOC106609822 coding downstream 195783 78095531 ~ 78107017 (+)
il17r il17r coding downstream 223334 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 326126 78225874 ~ 78277603 (+)
LOC118938868 LOC106591072 coding downstream 571849 78471597 ~ 78516510 (+)
G1328131 NA non-coding upstream 14387 77884730 ~ 77884950 (+)
G1328127 NA non-coding upstream 17461 77881453 ~ 77881876 (+)
G1328125 NA non-coding upstream 20468 77878496 ~ 77878869 (+)
G1328124 NA non-coding upstream 21502 77877628 ~ 77877835 (+)
G1328111 NA non-coding upstream 45760 77853168 ~ 77853577 (+)
G1328139 NA non-coding downstream 2640 77902388 ~ 77902624 (+)
G1328147 NA non-coding downstream 23971 77923719 ~ 77923944 (+)
G1328166 NA non-coding downstream 69321 77969069 ~ 77969347 (+)
G1328170 NA non-coding downstream 83090 77982838 ~ 77983375 (+)
G1328193 NA non-coding downstream 145888 78045636 ~ 78047325 (+)
G1327379 NA other upstream 1086049 76809860 ~ 76813288 (+)
G1327230 NA other upstream 1309452 76587574 ~ 76589885 (+)
G1326605 NA other upstream 2014190 75884811 ~ 75885147 (+)
G1326586 NA other upstream 2092818 75805999 ~ 75806519 (+)
G1326503 cand1 other upstream 2300822 75593591 ~ 75598515 (+)
G1328201 NA other downstream 170281 78070029 ~ 78070403 (+)
LOC118936267 mrps33 other downstream 849630 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 880583 78780201 ~ 78826735 (+)
G1328968 NA other downstream 1138856 79038604 ~ 79039457 (+)

Expression


Co-expression Network