G1328170


Basic Information

Item Value
gene id G1328170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 77982838 ~ 77983375 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517150
CACCTTATACACCCCACCTAACAGTACATTGTTCTAAATCAccaactactgtaaaacacaattcaacagcacatcgttctaaaccaccaactactgtaaaacacaattcaacagcacatcgttctaaaccaccaactactgtaaaacacaattcaacagcacatcgttctaaaccaccaactactgtaaaacacaattcaacagcacatcgttctaaaccaccaactactgtaaaacacatttcAACAGCACATCGTTCTAAACCACCAACTACTGTAAAACCATTCAACAGCACATCGTTCTAAACCAccaactactgtaaaacacatttcaacagcacatcgttctaaaccaccaact

Function

NR:

description
PREDICTED: mucin-6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517150 True 360 lncRNA 0.38 2 77982838 77983375

Neighbor

gene id symbol gene type direction distance location
LOC118938903 NA coding upstream 170194 77810841 ~ 77812644 (+)
LOC118938862 NA coding upstream 564632 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1512021 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2610775 75366958 ~ 75372063 (+)
LOC110499731 dyrk2 coding upstream 2616649 75332550 ~ 75366189 (+)
rergla LOC106609822 coding downstream 112156 78095531 ~ 78107017 (+)
il17r il17r coding downstream 139707 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 242499 78225874 ~ 78277603 (+)
LOC118938868 LOC106591072 coding downstream 488222 78471597 ~ 78516510 (+)
LOC110507939 LOC106592658 coding downstream 531046 78514421 ~ 78516253 (+)
G1328166 NA non-coding upstream 13491 77969069 ~ 77969347 (+)
G1328147 NA non-coding upstream 58894 77923719 ~ 77923944 (+)
G1328139 NA non-coding upstream 80214 77902388 ~ 77902624 (+)
G1328138 NA non-coding upstream 83090 77899337 ~ 77899748 (+)
G1328131 NA non-coding upstream 97888 77884730 ~ 77884950 (+)
G1328193 NA non-coding downstream 62261 78045636 ~ 78047325 (+)
G1328196 NA non-coding downstream 65495 78048870 ~ 78052823 (+)
G1328205 NA non-coding downstream 99763 78083138 ~ 78083460 (+)
G1328206 NA non-coding downstream 102650 78086025 ~ 78086271 (+)
G1328210 NA non-coding downstream 111716 78095091 ~ 78095295 (+)
G1327379 NA other upstream 1169550 76809860 ~ 76813288 (+)
G1327230 NA other upstream 1392953 76587574 ~ 76589885 (+)
G1326605 NA other upstream 2097691 75884811 ~ 75885147 (+)
G1326586 NA other upstream 2176319 75805999 ~ 75806519 (+)
G1326503 cand1 other upstream 2384323 75593591 ~ 75598515 (+)
G1328201 NA other downstream 86654 78070029 ~ 78070403 (+)
LOC118936267 mrps33 other downstream 766003 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 796956 78780201 ~ 78826735 (+)
G1328968 NA other downstream 1055229 79038604 ~ 79039457 (+)
G1329153 LOC106593057 other downstream 1635022 79618397 ~ 79621951 (+)

Expression


Co-expression Network