Gene
RNA
| Item | Value |
|---|---|
| gene id | G1328205 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 78083138 ~ 78083460 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1517198 | True | 243 | lncRNA | 0.48 | 2 | 78083138 | 78083460 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490691 | arhgef39 | coding | upstream | 16174 | 77958971 ~ 78066964 (+) |
| LOC118938903 | NA | coding | upstream | 270494 | 77810841 ~ 77812644 (+) |
| LOC118938862 | NA | coding | upstream | 664932 | 77416342 ~ 77505819 (+) |
| LOC118938861 | grip1 | coding | upstream | 1612321 | 75732149 ~ 76472933 (+) |
| LOC118938860 | NA | coding | upstream | 2711075 | 75366958 ~ 75372063 (+) |
| rergla | LOC106609822 | coding | downstream | 12071 | 78095531 ~ 78107017 (+) |
| il17r | il17r | coding | downstream | 39622 | 78123082 ~ 78148831 (+) |
| LOC118938866 | LOC108426397 | coding | downstream | 142414 | 78225874 ~ 78277603 (+) |
| LOC118938868 | LOC106591072 | coding | downstream | 388137 | 78471597 ~ 78516510 (+) |
| LOC110507939 | LOC106592658 | coding | downstream | 430961 | 78514421 ~ 78516253 (+) |
| G1328196 | NA | non-coding | upstream | 30315 | 78048870 ~ 78052823 (+) |
| G1328193 | NA | non-coding | upstream | 35813 | 78045636 ~ 78047325 (+) |
| G1328170 | NA | non-coding | upstream | 99763 | 77982838 ~ 77983375 (+) |
| G1328166 | NA | non-coding | upstream | 113791 | 77969069 ~ 77969347 (+) |
| G1328147 | NA | non-coding | upstream | 159194 | 77923719 ~ 77923944 (+) |
| G1328206 | NA | non-coding | downstream | 2565 | 78086025 ~ 78086271 (+) |
| G1328210 | NA | non-coding | downstream | 11631 | 78095091 ~ 78095295 (+) |
| G1328211 | mkrn1 | non-coding | downstream | 42974 | 78126434 ~ 78162526 (+) |
| G1328225 | NA | non-coding | downstream | 67567 | 78151027 ~ 78152928 (+) |
| G1328226 | LOC106576660 | non-coding | downstream | 70697 | 78154157 ~ 78156968 (+) |
| G1328201 | NA | other | upstream | 12735 | 78070029 ~ 78070403 (+) |
| G1327379 | NA | other | upstream | 1269850 | 76809860 ~ 76813288 (+) |
| G1327230 | NA | other | upstream | 1493253 | 76587574 ~ 76589885 (+) |
| G1326605 | NA | other | upstream | 2197991 | 75884811 ~ 75885147 (+) |
| LOC118936267 | mrps33 | other | downstream | 665918 | 78749330 ~ 78763988 (+) |
| LOC118938871 | braf | other | downstream | 696871 | 78780201 ~ 78826735 (+) |
| G1328968 | NA | other | downstream | 955144 | 79038604 ~ 79039457 (+) |
| G1329153 | LOC106593057 | other | downstream | 1534937 | 79618397 ~ 79621951 (+) |
| G1329159 | NA | other | downstream | 1580454 | 79663914 ~ 79664732 (+) |
