G1328206


Basic Information

Item Value
gene id G1328206
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 78086025 ~ 78086271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517199
gaatatgaaatgtcagaataatagtagagagaattatttatgtcagcttttgtttcttttatcacattcccagtgggtcagaagtttacataaactcaattagtatttggtggcattgcctttaaattgtttaacttgggtcaaacgtttcgggtagctttccacaagcttcccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtaactgagtcaggtttgtaggcctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517199 True 247 lncRNA 0.39 1 78086025 78086271

Neighbor

gene id symbol gene type direction distance location
LOC110490691 arhgef39 coding upstream 19061 77958971 ~ 78066964 (+)
LOC118938903 NA coding upstream 273381 77810841 ~ 77812644 (+)
LOC118938862 NA coding upstream 667819 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1615208 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2713962 75366958 ~ 75372063 (+)
rergla LOC106609822 coding downstream 9260 78095531 ~ 78107017 (+)
il17r il17r coding downstream 36811 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 139603 78225874 ~ 78277603 (+)
LOC118938868 LOC106591072 coding downstream 385326 78471597 ~ 78516510 (+)
LOC110507939 LOC106592658 coding downstream 428150 78514421 ~ 78516253 (+)
G1328205 NA non-coding upstream 2565 78083138 ~ 78083460 (+)
G1328196 NA non-coding upstream 33202 78048870 ~ 78052823 (+)
G1328193 NA non-coding upstream 38700 78045636 ~ 78047325 (+)
G1328170 NA non-coding upstream 102650 77982838 ~ 77983375 (+)
G1328166 NA non-coding upstream 116678 77969069 ~ 77969347 (+)
G1328210 NA non-coding downstream 8820 78095091 ~ 78095295 (+)
G1328211 mkrn1 non-coding downstream 40163 78126434 ~ 78162526 (+)
G1328225 NA non-coding downstream 64756 78151027 ~ 78152928 (+)
G1328226 LOC106576660 non-coding downstream 67886 78154157 ~ 78156968 (+)
G1328231 LOC106609808 non-coding downstream 78041 78164312 ~ 78175507 (+)
G1328201 NA other upstream 15622 78070029 ~ 78070403 (+)
G1327379 NA other upstream 1272737 76809860 ~ 76813288 (+)
G1327230 NA other upstream 1496140 76587574 ~ 76589885 (+)
G1326605 NA other upstream 2200878 75884811 ~ 75885147 (+)
LOC118936267 mrps33 other downstream 663107 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 694060 78780201 ~ 78826735 (+)
G1328968 NA other downstream 952333 79038604 ~ 79039457 (+)
G1329153 LOC106593057 other downstream 1532126 79618397 ~ 79621951 (+)
G1329159 NA other downstream 1577643 79663914 ~ 79664732 (+)

Expression


Co-expression Network