G1328210


Basic Information

Item Value
gene id G1328210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 78095091 ~ 78095295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517209
agcgaggtccatacagaaatagtttattgagatcggtgtggaagaacttgactggcctgcacagagccctgaccacaaccccatcgaacacctttggaatgaattggaacgccgactgcgagccaggcttaatcgcccaacatcagtgcccgacctcactaatgctctaatggctgaatggaagcaagtcccagcagcaatgttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517209 True 205 lncRNA 0.51 1 78095091 78095295

Neighbor

gene id symbol gene type direction distance location
LOC110490691 arhgef39 coding upstream 28127 77958971 ~ 78066964 (+)
LOC118938903 NA coding upstream 282447 77810841 ~ 77812644 (+)
LOC118938862 NA coding upstream 676885 77416342 ~ 77505819 (+)
LOC118938861 grip1 coding upstream 1624274 75732149 ~ 76472933 (+)
LOC118938860 NA coding upstream 2723028 75366958 ~ 75372063 (+)
rergla LOC106609822 coding downstream 236 78095531 ~ 78107017 (+)
il17r il17r coding downstream 27787 78123082 ~ 78148831 (+)
LOC118938866 LOC108426397 coding downstream 130579 78225874 ~ 78277603 (+)
LOC118938868 LOC106591072 coding downstream 376302 78471597 ~ 78516510 (+)
LOC110507939 LOC106592658 coding downstream 419126 78514421 ~ 78516253 (+)
G1328206 NA non-coding upstream 8820 78086025 ~ 78086271 (+)
G1328205 NA non-coding upstream 11631 78083138 ~ 78083460 (+)
G1328196 NA non-coding upstream 42268 78048870 ~ 78052823 (+)
G1328193 NA non-coding upstream 47766 78045636 ~ 78047325 (+)
G1328170 NA non-coding upstream 111716 77982838 ~ 77983375 (+)
G1328211 mkrn1 non-coding downstream 31139 78126434 ~ 78162526 (+)
G1328225 NA non-coding downstream 55732 78151027 ~ 78152928 (+)
G1328226 LOC106576660 non-coding downstream 58862 78154157 ~ 78156968 (+)
G1328231 LOC106609808 non-coding downstream 69017 78164312 ~ 78175507 (+)
G1328233 NA non-coding downstream 70996 78166291 ~ 78171145 (+)
G1328201 NA other upstream 24688 78070029 ~ 78070403 (+)
G1327379 NA other upstream 1281803 76809860 ~ 76813288 (+)
G1327230 NA other upstream 1505206 76587574 ~ 76589885 (+)
G1326605 NA other upstream 2209944 75884811 ~ 75885147 (+)
LOC118936267 mrps33 other downstream 654083 78749330 ~ 78763988 (+)
LOC118938871 braf other downstream 685036 78780201 ~ 78826735 (+)
G1328968 NA other downstream 943309 79038604 ~ 79039457 (+)
G1329153 LOC106593057 other downstream 1523102 79618397 ~ 79621951 (+)
G1329159 NA other downstream 1568619 79663914 ~ 79664732 (+)

Expression


Co-expression Network