G1328398 (il17r)


Basic Information

Item Value
gene id G1328398
gene name il17r
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 78146250 ~ 78148909 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517500
agtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattctatGGACATGATCACGTTTTATTGTCCCTGTACCAACCAGATAAGGAAGTGATGTCAGAACTAAATATATGGATTATGCTGTACAAACCCATTGGCTGATTCATTGACTCCAGGTTTGTTCATCATTTCAAATCAGGAAATCAGGAAAACTTTTATAGACAATAGTGTTATAACAACATGAAAAGACGATGCTGAACAACTAAAGTGTTTATGATCCAGAGTATATATGATTAACATCCGTTTTCTAGAACGTTCTCTCCGCGTTTTTATTGCAGAAGCCAGAGTATTTAATTGTTTAGGTAGAGAGCCTGTTGTAGCCTGGCCAGTGCCACCAGTGGACTGTCGCTGTCCTCTCCTACAGGGTAGTGGACAGAAGAGTCCTGCTGGAAGGAGCTCCTGGAGATATAGCCCAGGTCTGACCCACTGACGGGTCTCTTCTCCTGGGCAGCAGGCTTCATCACCTCcccaccctcctccatctctaccgGCTGGGAGTGGGTTATCTCTGGCAGGGGAAGGAGGTACGGAATCTGACTATCCATCGGTACAGGTGGGGTAACCTGGATGGAGCTGAAGGACAGTCGTGATTGGCCCATCTCTCCACGCGGTTGTGATAGGTAGCCGTTCTCCGTGGACACAGAGGTGATTTCTGGGATAGCACTGAGACCACAGAGTGACAGCTGGAGAGACATGAGTTGTTCCAGGGTGTCAACAGAGGGTTGACAAGAAGGACTGTatgcctcctcctcttcctcgttcTCTAGAGGGCAACGGTCTGCTGTTCCCCACCTCTCCTGTAGGCGGAGACAGTTCTCTCTGGCCAAGGGTGGCTCACTCGGGAGAAGATCTGACAACCCACAGGGTTGACTCTCCAGGGCATTGGGGTGCAGATCAGAGATAAGTACCCCGGGTGGGGCCTCAACGACTGGGTATGATGGGTACACCTGGTGGCTGTCGGAGCTGACCCCTGGAAGAAGCTCCAGCACACACGTCCCATGACCTGGAAGGAGAAGACTTTATTAATACGTATCAGACAGACATTTCTTCTGTTGTACCAAACCCCTTTAGCCTGGgcaccagtctgtttgtgctatcattccactcccCACTGATAACCTTACCTTCCAGTTTCACTTCAGGAGTCGAGACCTGGACTCCCAGGCTGTTTTCATTGATCTCTACATCATAGTTGGAGATTGGAGGCCCCTTCCTGTATTCTGGAACACACTCTAGAACAGGAGGCCCCTTCCTGTATTCTGGAACAAACTCCAAAACAGGAGGCTCCTTCCTGTATTCTGGAACAAACTCTAGAACAGGTGGCCCCTTCCTGTACTCTGGAACAAACTCTAGAACAGGTGGCCCATTCCTGTATTCTGGAACAAACTCTAGAACAGGCGCGACCGGCTTTTCCAGTAGAGCGTCATACTCTGTTACTGCGAACACTTCCTCCTCTGCGTTGATGTCAACACACTCCTGTTCAAACCAGTCTGGGTTCTCTAACTGGAACGCCTGGAAGGCTTCGATGGCGTCTCGCAGATCCCTCCCCGGTGGACATTTGAAGTACTCTTCCACTCCGATCCCCTCGATGTGGCTGACCTGATTTGAATTAAATCATTCATTTTATTTGACACGTTCAAAATATACTGAacgaaaaaatatataaacgcaacaactttgaagattttactgagttacagttcatatcaggaaatcagtcaatggaaATAAATTCCTTAGGCCTAAATCtgtggatttaacatgactgggcaggggcgcagccgtGGGTggggggcataggcccacccacttggcagccaggcccacccactaaGGAGCCAGGCCCAGTTAATCAGAATGTGTTTTTTccctacaaaagggctttattacagacagaaatattcctCAGCACATTTTTAAAGGggcccttttattgtccccagaacaaggtgcacctgtgtaatgatcatgctgtttaatcagcttcttgatatgccacacctgtcagatggatggattatcttggcaaaagagaatatgctcactaacagggatgtaaaacacatttgtgaacaacatttgagaaaaaaatatatatatattggtgtAGTACATAAAGAGTTTCCTCAGCCATGAGAGTACTGgtacactaactaactaactaactaactaactaactaactaactaactaactaactaactagctagctagctagctagctcgctcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccacacacacacacacacacacacacacacaccaaaagttattttgttggcatttaaatacgtccccattaccagtaaaacatcatcaaaacctGTTTCTTTCACTTACTGTGCTGTTTTGCTGTTTCG
>TU1517504
CCAGTTTCACTTCAGGAGTCGAGACCTGGACTCCCAGGCTGTTTTCATTGATCTCTACATCATAGTTGGAGATTGGAGGCCCCTTCCTGTATTCTGGAACACACTCTAGAACAGGAGGCCCCTTCCTGTATTCTGGAACAAACTCCAAAACAGGAGGCTCCTTCCTGTATTCTGGAACAAACTCTAGAACAGGTGGCCCCTTCCTGTACTCTGGAACAAACTCTAGAACAGGTGGCCCATTCCTGAACTCTGGAACAAACTCTAGAACAGGTGGCCCATTCCTGTATTCTGGAACAAACTCTAGAACAGGCGCGACCGGCTTTTCCAGTAGAGCGTCATACTCTGTTACTGCGAACACTTCCTCCTCTGCGTTGATGTCAACACACTCCTGTTCAAACCAGTCTGGGTTCTCTAACTGGAACGCCTGGAAGGCTTCGATGGCGTCTCGCAGATCCCTCCCCGGTGGACATTTGAAGTACTCTTCCACTCCGATCCCCTCGATGTGGCTG
>TU1517505
CCAGTTTCACTTCAGGAGTCGAGACCTGGACTCCCAGGCTGTTTTCATTGATCTCTACATCATAGTTGGAGATTGGAGGCCCCTTCCTGTATTCTGGAACACACTCTAGAACAGGAGGCCCCTTCCTGTATTCTGGAACAAACTCCAAAACAGGAGGCTCCTTCCTGTATTCTGGAACAAACTCTAGAACAGGTGGCCCCTTCCTGTACTCTGGAACAAACTCTAGAACAGGTGGCCCATTCCTGTATTCTGGAACAAACTCTAGAACAGGTGGCCCATTCCTGAACTCTGGAACAAACTCTAGAACAGGCGCGACCGGCTTTTCCAGTAGAGCGTCATACTCTGTTACTGCGAACACTTCCTCCTCTGCGTTGATGTCAACACACTCCTGTTCAAACCAGTCTGGGTTCTCTAACTGGAACGCCTGGAAGGCTTCGATGGCGTCTCGCAGATCCCTCCCCGGTGGACATTTGAAGTACTCTTCCACTCCGATCCCCTCGATGTGGCTG

Function

NR:

description
interleukin-17 receptor precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517500 False 2543 lncRNA 0.46 2 78146250 78148909
TU1517504 False 509 lncRNA 0.51 3 78147121 78147707
TU1517505 True 509 lncRNA 0.51 2 78147121 78147707

Neighbor

gene id symbol gene type direction distance location
LOC118938863 NA coding downstream 121320 78024443 ~ 78024930 (-)
LOC110490687 LOC105023115 coding downstream 351384 77675445 ~ 77794866 (-)
LOC110490866 NA coding downstream 472388 77672463 ~ 77673862 (-)
LOC110499734 LOC106609838 coding downstream 540229 77601746 ~ 77606021 (-)
trnak-cuu-19 NA coding downstream 547926 77587377 ~ 77598491 (-)
LOC118938864 LOC106576660 coding upstream 64 78148973 ~ 78157083 (-)
LOC118938865 mkrn1 coding upstream 10882 78159791 ~ 78194251 (-)
LOC118938867 LOC106576670 coding upstream 150423 78298576 ~ 78452504 (-)
LOC118938869 NA coding upstream 424631 78573540 ~ 78574322 (-)
LOC118938870 LOC106592244 coding upstream 450680 78599589 ~ 78623477 (-)
G1328396 NA non-coding downstream 4787 78140440 ~ 78141463 (-)
G1328394 NA non-coding downstream 8262 78137501 ~ 78137988 (-)
G1328391 NA non-coding downstream 11738 78133948 ~ 78134512 (-)
G1328366 NA non-coding downstream 19256 78126011 ~ 78126994 (-)
G1328383 NA non-coding downstream 27874 78118155 ~ 78118376 (-)
G1328403 NA non-coding upstream 13643 78162552 ~ 78163074 (-)
G1328406 NA non-coding upstream 27244 78176153 ~ 78177704 (-)
G1328411 NA non-coding upstream 37960 78186869 ~ 78190642 (-)
G1328441 NA non-coding upstream 112002 78260911 ~ 78261541 (-)
G1328447 NA non-coding upstream 127805 78276714 ~ 78279232 (-)
G1328123 NA other downstream 271646 77871279 ~ 77874604 (-)
LOC110515635 LOC106576658 other downstream 639476 77418263 ~ 77506802 (-)
G1326996 NA other downstream 2147250 75998506 ~ 75999000 (-)
G1326164 NA other downstream 3092893 75052749 ~ 75053357 (-)
G1326095 NA other downstream 3372297 74772299 ~ 74773953 (-)
G1328815 NA other upstream 614190 78763099 ~ 78766048 (-)
G1328861 NA other upstream 721416 78870325 ~ 78871031 (-)
G1328892 NA other upstream 777005 78925914 ~ 78926137 (-)
G1328987 NA other upstream 880758 79029667 ~ 79030956 (-)

Expression


Co-expression Network