Gene
RNA
| Item | Value |
|---|---|
| gene id | G1328441 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 78260911 ~ 78261541 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sine oculis-binding protein homolog, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1517589 | True | 427 | lncRNA | 0.49 | 2 | 78260911 | 78261541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938865 | mkrn1 | coding | downstream | 66660 | 78159791 ~ 78194251 (-) |
| LOC118938864 | LOC106576660 | coding | downstream | 103828 | 78148973 ~ 78157083 (-) |
| LOC118938863 | NA | coding | downstream | 235981 | 78024443 ~ 78024930 (-) |
| LOC110490687 | LOC105023115 | coding | downstream | 466045 | 77675445 ~ 77794866 (-) |
| LOC110490866 | NA | coding | downstream | 587049 | 77672463 ~ 77673862 (-) |
| LOC118938867 | LOC106576670 | coding | upstream | 37791 | 78298576 ~ 78452504 (-) |
| LOC118938869 | NA | coding | upstream | 311999 | 78573540 ~ 78574322 (-) |
| LOC118938870 | LOC106592244 | coding | upstream | 338048 | 78599589 ~ 78623477 (-) |
| LOC118938904 | LOC106592658 | coding | upstream | 376370 | 78637911 ~ 78639774 (-) |
| LOC118936340 | LOC106592244 | coding | upstream | 415853 | 78677394 ~ 78695781 (-) |
| G1328411 | NA | non-coding | downstream | 70269 | 78186869 ~ 78190642 (-) |
| G1328406 | NA | non-coding | downstream | 83207 | 78176153 ~ 78177704 (-) |
| G1328403 | NA | non-coding | downstream | 97837 | 78162552 ~ 78163074 (-) |
| G1328398 | il17r | non-coding | downstream | 112002 | 78146250 ~ 78148909 (-) |
| G1328396 | NA | non-coding | downstream | 119448 | 78140440 ~ 78141463 (-) |
| G1328447 | NA | non-coding | upstream | 15173 | 78276714 ~ 78279232 (-) |
| G1328427 | NA | non-coding | upstream | 27524 | 78289065 ~ 78344304 (-) |
| G1328472 | NA | non-coding | upstream | 99263 | 78360804 ~ 78361576 (-) |
| G1328505 | NA | non-coding | upstream | 180236 | 78441777 ~ 78442198 (-) |
| G1328123 | NA | other | downstream | 386307 | 77871279 ~ 77874604 (-) |
| LOC110515635 | LOC106576658 | other | downstream | 754137 | 77418263 ~ 77506802 (-) |
| G1326996 | NA | other | downstream | 2261911 | 75998506 ~ 75999000 (-) |
| G1326164 | NA | other | downstream | 3207554 | 75052749 ~ 75053357 (-) |
| G1326095 | NA | other | downstream | 3486958 | 74772299 ~ 74773953 (-) |
| G1328815 | NA | other | upstream | 501558 | 78763099 ~ 78766048 (-) |
| G1328861 | NA | other | upstream | 608784 | 78870325 ~ 78871031 (-) |
| G1328892 | NA | other | upstream | 664373 | 78925914 ~ 78926137 (-) |
| G1328987 | NA | other | upstream | 768126 | 79029667 ~ 79030956 (-) |
