Gene
RNA
| Item | Value |
|---|---|
| gene id | G1328583 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 78614189 ~ 78615027 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| reverse transcriptase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1517796 | True | 232 | lncRNA | 0.43 | 2 | 78614189 | 78615027 |
78,612,400
78,612,800
78,613,200
78,613,600
78,614,000
78,614,400
78,614,800
78,615,200
78,615,600
78,616,000
78,616,400
78,616,800
78,617,200
78,617,600
78,618,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507940 | LOC106592244 | coding | upstream | 68029 | 78525988 ~ 78546160 (+) |
| trnaa-ugc-124 | NA | coding | upstream | 81649 | 78532470 ~ 78532540 (+) |
| LOC118938868 | LOC106591072 | coding | upstream | 97679 | 78471597 ~ 78516510 (+) |
| LOC110507939 | LOC106592658 | coding | upstream | 97936 | 78514421 ~ 78516253 (+) |
| LOC118938866 | LOC108426397 | coding | upstream | 336586 | 78225874 ~ 78277603 (+) |
| LOC110510817 | LOC106592244 | coding | downstream | 34547 | 78649574 ~ 78658219 (+) |
| LOC118936267 | mrps33 | coding | downstream | 134303 | 78749330 ~ 78763988 (+) |
| LOC118938871 | braf | coding | downstream | 165174 | 78780201 ~ 78826735 (+) |
| LOC118938872 | large1 | coding | downstream | 533438 | 79148465 ~ 79293033 (+) |
| LOC118938875 | NA | coding | downstream | 996667 | 79608818 ~ 79640460 (+) |
| G1328561 | NA | non-coding | upstream | 27446 | 78565910 ~ 78586743 (+) |
| G1328548 | NA | non-coding | upstream | 40679 | 78571404 ~ 78573510 (+) |
| G1328546 | NA | non-coding | upstream | 89292 | 78524652 ~ 78524897 (+) |
| G1328524 | NA | non-coding | upstream | 95278 | 78470353 ~ 78518911 (+) |
| G1328526 | NA | non-coding | upstream | 97687 | 78516038 ~ 78516502 (+) |
| G1328596 | NA | non-coding | downstream | 16515 | 78631542 ~ 78632729 (+) |
| G1328598 | NA | non-coding | downstream | 21796 | 78636823 ~ 78678612 (+) |
| G1328632 | NA | non-coding | downstream | 84756 | 78699783 ~ 78745994 (+) |
| G1328753 | NA | non-coding | downstream | 131465 | 78746492 ~ 78746705 (+) |
| G1328754 | NA | non-coding | downstream | 212762 | 78827789 ~ 78830869 (+) |
| G1328201 | NA | other | upstream | 543786 | 78070029 ~ 78070403 (+) |
| LOC110490691 | arhgef39 | other | upstream | 596378 | 77958971 ~ 78066964 (+) |
| G1327379 | NA | other | upstream | 1800901 | 76809860 ~ 76813288 (+) |
| G1327230 | NA | other | upstream | 2024304 | 76587574 ~ 76589885 (+) |
| G1326605 | NA | other | upstream | 2729042 | 75884811 ~ 75885147 (+) |
| G1328968 | NA | other | downstream | 423577 | 79038604 ~ 79039457 (+) |
| G1329153 | LOC106593057 | other | downstream | 1003370 | 79618397 ~ 79621951 (+) |
| G1329159 | NA | other | downstream | 1048887 | 79663914 ~ 79664732 (+) |
