G1328737


Basic Information

Item Value
gene id G1328737
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 78699584 ~ 78707685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517984
atagagacagtagatctagctggtctgtcattatataatagagacagtagatctagctggtctgtaatcatataaatgagacagtagatctagctggtctgtcataatataaatgagacagtagaactagctggtctgtcataatgtaatagagacagtagatctagctggtctgtgataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctgatctgtcataatataatagagacagcaggtctagctggtctgacataatataacaaagacagtaggtctaactggtctgtcataatataacaaagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcatagtacaatagagacagtagatctagctggtctgtcatattataatagtgacactagacatagctggtctgccataatataatagagaaagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagcttgtctgtcataatgtaatagagacagtagttctagctggtctgtgataatataatagagacattagatctagctggtctgtcacaatataatagagacagtagatctagcaggtctgtcataatataatagagacagtagatctatctggtcggtcataatataaatgacacagtatatctagctggtctgtcaaaatgtaatagagacagtagatctagctggtctgtcataatataatagagacagtagaaatagctggtctgtcataatacaatagagacatagagacagtagatctagctggtctgtcataatataatagagacagtagatctatctggtctgtcataatataatagagacagtatatctagctggtctgtcatattataatagagacagtagatctagctggtctgtcataatataatagagacagtagaaatagctggtctgtcataatataatagagacagtaggtctagctggtctgacataatataaatagagacagtagatatagctggtaaatcataatataaatgacacagtagatctagctggtctgtcaaaatgtaatagagacagtagatctagctggtctgtcataatgtaacaaagacagtagatctagcaggtctgtcataatataatagagacagtagaaatagttggtctgtcataatacaatagagacatagagacagtagatctagctggtctgtcataatataatacagacagtaggtctagctggtctgacataatataaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctacctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtgataatataatagagacattagatctagctggtctgttacaatataatagagacagtagatctagcaggtctgtcataatataatagagacagtagatctatctggtcggtcataatataaatgacacagtagatctagctggtctgtcaaaatgtaatagagacagtagatctagctggtctgtcataatgtaacaaagacagtagatctagcaggtctgtcataatataatagagacagtagaaatagctggtctgtcataatacaatagagacatagagacagtagatctagctggtctgtcataatatcatagagacagtagatctagctggtctgtcataatataatagagagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcatagtataatagagacagtagatctaattAATGAtctaatccctgagctgacaaggtacaaatctgtcgttctgcccctgaacaaagcagttaacccactgttactagGCTTAATTGCAaagaataatttgttcttaactgacttgcctagttaaataaaggttaaataaataaagtcaTAGGCTCTGTACTGATAAGTGGCTCTGGCACGGGCTGCTTGGGGCTGGGGGTAAGAGTCCATGGGTTGGGTAGGATATGGCAAATCCGACCACAATGCTATCTttctgcttcctgtttacaagcaaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517984 True 2249 lncRNA 0.36 5 78699584 78707685

Neighbor

gene id symbol gene type direction distance location
LOC118936340 LOC106592244 coding downstream 3803 78677394 ~ 78695781 (-)
LOC118938904 LOC106592658 coding downstream 59810 78637911 ~ 78639774 (-)
LOC118938870 LOC106592244 coding downstream 76107 78599589 ~ 78623477 (-)
LOC118938869 NA coding downstream 125262 78573540 ~ 78574322 (-)
LOC118938867 LOC106576670 coding downstream 247080 78298576 ~ 78452504 (-)
LOC118938905 NA coding upstream 171055 78878740 ~ 78918133 (-)
LOC118938873 LOC106590959 coding upstream 599495 79307180 ~ 79340005 (-)
LOC110536863 LOC105029310 coding upstream 779318 79487003 ~ 79489128 (-)
LOC118938874 NA coding upstream 901861 79609180 ~ 79612871 (-)
LOC110513674 LOC106593057 coding upstream 910817 79618502 ~ 79623426 (-)
G1328719 NA non-coding downstream 35699 78663495 ~ 78663885 (-)
G1328717 NA non-coding downstream 37364 78661818 ~ 78662220 (-)
G1328680 NA non-coding downstream 142440 78556843 ~ 78557144 (-)
G1328666 NA non-coding downstream 178494 78520827 ~ 78521090 (-)
G1328665 NA non-coding downstream 178838 78520547 ~ 78520746 (-)
G1328743 NA non-coding upstream 5148 78712833 ~ 78716008 (-)
G1328751 NA non-coding upstream 24590 78732275 ~ 78732712 (-)
G1328738 NA non-coding upstream 26661 78734346 ~ 78739132 (-)
G1328808 NA non-coding upstream 39507 78747192 ~ 78830870 (-)
G1328815 NA non-coding upstream 55414 78763099 ~ 78766048 (-)
G1328123 NA other downstream 824980 77871279 ~ 77874604 (-)
LOC110515635 LOC106576658 other downstream 1192810 77418263 ~ 77506802 (-)
G1326996 NA other downstream 2700584 75998506 ~ 75999000 (-)
G1326164 NA other downstream 3646227 75052749 ~ 75053357 (-)
G1328861 NA other upstream 162640 78870325 ~ 78871031 (-)
G1328892 NA other upstream 218229 78925914 ~ 78926137 (-)
G1328987 NA other upstream 321982 79029667 ~ 79030956 (-)
G1329004 NA other upstream 367605 79075290 ~ 79075536 (-)

Expression


Co-expression Network