G1328738


Basic Information

Item Value
gene id G1328738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 78734346 ~ 78739132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1517985
atgtaacaaaggcagtagatctagccggtctgtcataatgtaatagagacagtagatctagctggtctgtaataatataaatgagacagtagatctagctggtctgtcataatataaatgagacagtagatctagctggtctgtcataatgtaaatgagaaagtagatctagctggtatgtcattatataatagagacagtagatctagctggtctgtcattatataatagagacagtatatctagctggtctgtcataatgtaatagagacagaagatctagctggtctgtgataatgtaatagagacagtatatctagctggtctgtcataatgtaatagagacagtagatctagctgttctgtcataatgtaatagagacagtagaccgagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcaaaatataatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatatagctggtctgtcatactataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcatactataatagagacagtagatctatctggtctgtcataatataatagagacagtagatctagctggtctgtcatacgataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatgtaacaaagacagtagatctagctggtctgtcataatgtaatagacacagtaggtctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatatattagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtaatcaaataaatgagacagtagatctagctggtctgtcattatataatagagacagtagatctagctggtctgtaatcatataaatgagacagtagatctagctggtctgtcataatataaatgagacagtagaactagctggtctgtcataatgtaatagagacagtagatctagctggtctgtgataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagagctagctggtctgtgataatataatagagacagtagatctagctgttctgtcataatataatagagacagtagacatagctggtctgtcataatataacaaagacagtagatctagctggtctgtcataatataacaaagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcatagtacaatagagacagtagatctagctggtctgtcatattataatagtgacactagacatagctggtctgccataatacaatagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtcataatgtattagagacagtagatctagctggtctgtcataatgtaatagagacagtagatctagctggtctgtgataatacaatagagacattagatctagctggtctgtcacaatataatagagacagtagatctagcaggtctgtcattatataatagagacagtagatctatctggtcggtcataatataaatgacacagtagatctagctggtctgtcaaaatgtaatagagacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1517985 True 1903 lncRNA 0.37 2 78734346 78739132

Neighbor

gene id symbol gene type direction distance location
LOC118936340 LOC106592244 coding downstream 38565 78677394 ~ 78695781 (-)
LOC118938904 LOC106592658 coding downstream 94572 78637911 ~ 78639774 (-)
LOC118938870 LOC106592244 coding downstream 110869 78599589 ~ 78623477 (-)
LOC118938869 NA coding downstream 160024 78573540 ~ 78574322 (-)
LOC118938867 LOC106576670 coding downstream 281842 78298576 ~ 78452504 (-)
LOC118938905 NA coding upstream 139608 78878740 ~ 78918133 (-)
LOC118938873 LOC106590959 coding upstream 568048 79307180 ~ 79340005 (-)
LOC110536863 LOC105029310 coding upstream 747871 79487003 ~ 79489128 (-)
LOC118938874 NA coding upstream 870414 79609180 ~ 79612871 (-)
LOC110513674 LOC106593057 coding upstream 879370 79618502 ~ 79623426 (-)
G1328751 NA non-coding downstream 1634 78732275 ~ 78732712 (-)
G1328743 NA non-coding downstream 18338 78712833 ~ 78716008 (-)
G1328723 NA non-coding downstream 26255 78669486 ~ 78708091 (-)
G1328737 NA non-coding downstream 26661 78699584 ~ 78707685 (-)
G1328719 NA non-coding downstream 70461 78663495 ~ 78663885 (-)
G1328808 NA non-coding upstream 8060 78747192 ~ 78830870 (-)
G1328815 NA non-coding upstream 23967 78763099 ~ 78766048 (-)
G1328822 NA non-coding upstream 47882 78787014 ~ 78841501 (-)
G1328833 NA non-coding upstream 73700 78812832 ~ 78813254 (-)
G1328853 NA non-coding upstream 116018 78855150 ~ 78856880 (-)
G1328123 NA other downstream 859742 77871279 ~ 77874604 (-)
LOC110515635 LOC106576658 other downstream 1227572 77418263 ~ 77506802 (-)
G1326996 NA other downstream 2735346 75998506 ~ 75999000 (-)
G1326164 NA other downstream 3680989 75052749 ~ 75053357 (-)
G1328861 NA other upstream 131193 78870325 ~ 78871031 (-)
G1328892 NA other upstream 186782 78925914 ~ 78926137 (-)
G1328987 NA other upstream 290535 79029667 ~ 79030956 (-)
G1329004 NA other upstream 336158 79075290 ~ 79075536 (-)

Expression


Co-expression Network