XLOC_032259 (srgap3)


Basic Information

Item Value
gene id XLOC_032259
gene name srgap3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 41554794 ~ 41757181 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063002
GTTGATAATAAATGACTGAACTGGAGTCAGTCTGTATACAGAGTTACTTACGTTTTGACAACATTAACTTTCGCTTTCAGTACAGCAGAAATGAACAACGCAGGATCTTCTACGTGGCTGCCCCCCGCATTTGCATGGATAAACCCCAAAACATGGGGGTCAAACAAAGAAAAGGTAGGCTACGATAAACAAATATTTAGTATGCCAACGTAAACTAGTTATCCAAAATTAGTGTGTTTCTCCAAAGATTATGTGCCAAAAAGGAAGTTTTTATTAATGGTGTCTGGTGTAAACGAAACGccctctgtgtgtgcgtgtgtgtgtgtgtgcgcgccctGGGAGGGGTGCATATGGAACTGATTGGATTGGTTGAGGGAGTGAATTCGACAATAGGAGGAGTCTCATACGACGCTCGGGCGCTATTCTCTTCTTCGCTTTGCCGCTGAGATTGTAATGCAACGGAGCCCAATCAAGCTCAGATTATACCATCTCAGCTCTCGCTTCCAGCGCACGCGGACATGAGGACCACATAAACGGGATGGGCACAGAAACAACGCCGTTCTGCTGAACCCTCTTGTTGTATGCAGGAATTGTATTATTTTCTTCAGTCACTTCAGATGGCAGATCTTGAGCAAGGAGGAGCAGCCTCTCCCCGAGCTCAGCAGCTCTTCTGAACGCGAGGGATCGGATCTGAGAAAGCGCAGGTGTTTTCGGGGGGCTTTTGGCTGCCCTTGTGCTAGTCTCAGAGGAGGAAAGTGTCCAGATTATCTGCCGATGTGCTCTGAAGGACACTTCTGATAGTAACTGGCGAGGAAGAAGGTGGGGAAAAAAGCTGCAAACTGTGACAGTCGGGAGCTCGCGCGCAAGGCTAAACATATCACTGGATTCTACGTGTATAcctcaaaaagaaaaatgtcatcTCAGACGAAGATTAAGAAAGACAAGGAGATCATTGCGGAGTATGAGACGCAAGTCAAAGAAATCCGTAATCAGTTGGTGGAGCAGTTCAAGTGCCTGGAGCAGCAATCAGAGGCTCGGATCCAGCTGTTGCAGGACCTGCAAGAGTTTTTCCGGCGTAAGGCAGAGATTCAGCTGGAGTATTCGCGCAGTCTGGAGAAACTGGCCGAAAGGTTTTCCTCAAAGATCCGTGGCCCAAGGAAAGAACAACACCTCCTCTCTTCGGTAAACTGCTGGTATCTGGTTTTGAACCAGACTCGAAGAGAAAGCAGGGATCACGCCACACTGAACGACATCTACATCAATAATGTGATCGTTCGTCTGGCTCAGATCAGCGAGGATGTCATCCGGCTCTTTAAAAAGAGTAAAGAAATTGGCATTCAGATGCACGAGGAGCTGGTGAAAGTGACGAACGAGCTGTACACTGTGATGAAGACGTATCACATGTACCACACAGAGAGCATCAGCGCCGAGAGCAAACTGAAGGATGCTGAGAAACAAGAAGAGAAGCAATTTAGCAAATCTGGAGACCTGAATGTCAACCTCCTGCGCCATGAGGACAGACCTCAGCGCCGCAGCTCGGTTCGGAAGATCGAGAAAATGAAGGAGAAGAGGCAAGCCAAGTACTCCGAGAACAAACTGAAATGCACGAAAGCCCGCAATGACTACTTATTGAACCTGGCAGCCACCAACGCAGTGGTAGCAAAATATTACATCCACGACGTCTCGGATATGATTGATTGTTGTGACCTCGGCTATCATGCTAGCTTGGCACGCACATTAAGGACGTATCTATCAGCTGAGTATAATCTGGAGACCTCTCGCCATGAAGGTTTAGACATCATTGAGAATGCCGTGGATAACCTGGACCCTCGCAGTGACAAGCACAAGATCATGGACATGTACAATCAGGTCTTCTGTCCACCCATGCGCTTTGAGTTTCTGCCGCACATGGGAGATGAGGTGTGCCAGGTTAGTGCCCAGCAGCCCGTGCAGACTGAACTGCTGATGCGTTTCCACCAGCTGCAGTCCCGATTGGCCACGCTCAAAATTGAGAACGAGGAGGTACGCAAGACCTTGGATGCCACCATGCAGACCTTACAAGACATGCTGACAGTGGAGGACTTTGATGTGTCAGATGCCTTCCAACACAGCCGATCCACTGAGTCCATTAAATCTGTGGCTTCAGAGAGTTACATGAGCAAGTTAAACATCGCAAAGAGACGAGCCAATCAGCAGGAGACAGAAGTCTTTTACTTCACTAAATTCAAGGAGTACCTGAACGGCAGTAACCTCATCATTAAGCTGCAGGCCAAGCATGACCTGCTAAAACAGACTCTGGGGGAAGGAGAAAGAGCTGAATGTGGAACTACAAGACCCCCAACCCTCCCCCCGAAACCACAGAAATTGCGGAAACCGAGGCCTCGTTCCGTCTATAACCATAAGCTGTTTAACGGCAATATGGAGAGTTTCATTAAGGATTCAGGTCAAGCCATTCCTCTGGTGGTAGAGAGCTGCATTCGATACATCAATCTATATGGCCTGCAACAGCAAGGCATATTCAGAGTTCCTGGATCTCAGGTGGAAGTCAATGATATTAAAAATTCATTCGAAAGAGGTGAGGACCCACTGGTGGATGATCAGAGCGATCATGACATTAACTCAGTGGCAGGTGTGCTCAAGCTGTATTTCCGAGGGCTGGAAAACCCTCTGTTCCCCAAGGAACGCTTCCTGGATATGATCTCCACTGTCAAGCTTGAATCATCTGCAGAAAGAGCCCACCACATCCAGCAGATCATCGTTACCCTTCCTCGCACCGTCATCATCGTCCTGCGATACCTGTTCGCTTTTCTCAATCATCTGTCCCAGTACAGTGATGAGAACATGATGGACCCGTATAACCTTGCCATCTGTTTCGGACCCACTCTAATGCCCATCCCCGATGGTCAAGACCCCGTGGCCTGTCAGGCTCATGTTAACGAAGTCATCAAAACCATCATCATGCACAATGAGATCATCTTCCCCAGCCCGCGCGAGCTGGACGGCCCCGTCTATGAGAAGTGCATGACTGGAGGAGAGGAGTACTGTGACAGCCCTCATAGTGAACCAGGCACCATTGATGAAGCTGACAATTGCACCGAACCACACACAAGCGATGACGaaGTGGAGCAGATTGAAGCCATTGCTAAGTTCGACTACATGGGTCGGACTCCTCGAGAGTTGTCTTTCAAAAAAGGTGCATCCCTTTTGCTGTATCATCGTGCATCAGAGGACTGGTGGGAGGGCAGGCACAATGGAGTGGATGGCCTTATTCCTCACCAATATATTGTCGTACAAGATCTgGATGATGCGTTCTCTGATAGTCTGAGTCAGAAGGCTGACAGCGAGGCCAGCAGTGGACCTTTACTGGACGATAAAGCTTCATCCAAAAACGATCTGCACTCCCCATGTGAACCTTCGGCTGATTACAACTTCAGCGGGGTCATGGGCCGGGTGAGGTTGCGTTCAGATGGCTCTGCTATTCCTCGACGCCGCAGTGGCACAGACTCTCACAGTCCTCCTCGGGACACACCGCCGCGGGCCGCCGCTTGTCCCAGCAGCCCTCATAAGGTGGCCGTCAACAGGAGCCACATCGAAAGCCCTGAGAAGAGGCGTCTGGGCACGTTTGGCAGTGCAGGCAGCATTAACTACCCTGAGAGAAAGATCTACCCTGAGGGTCACCCGCTCAGACCTGTGCCTGGAGCAACAAGACACAGCAGCCTCGGAGACCACAAATCCTTAGAAGCAGAGGCTTTAGCTGAGGACATCGAGAAAACGATGAACACGGCACTTCACGAGCTCCGCGAACTAGAGCGTCAAAACACGGCCAAACAAGCTCCCGACGTGGTTCTGGACACCTTAGAACCACTCAAGAACCCAGTGAGCTCCGAACCAGCTAGTCCGCTACACACCATCATGATCCGAGACCCCGACGCGGCCCTGAGGCGCAGTAGCAGCTCCACCTCAGAGATGATGACCACCTTCAAACCGGCTCTATCCGCCAGGCTGGCTGGAGCCCAGCTCAGACCTCCACCCATGAGACCTGTCCGGCCTCCGCCAACACAGCACCGCTCCAGcagctccagctcctccggggtgGGAAGCCCGGCCATCACGCCAACCGAAAAGATCTTTCCCAACAACCCAAGCAATGCTGCGGCTTCCTCTGCCAATTCAGGAGAGAAACCTGGAACCATGTAG
>TCONS_00063003
ATGCAACGGAGCCCAATCAAGCTCAGATTATACCATCTCAGCTCTCGCTTCCAGCGCACGCGGACATGAGGACCACATAAACGGGATGGGCACAGAAACAACGCCGTTCTGCTGAACCCTCTTGTTGTATGCAGGAATTGTATTATTTTCTTCAGTCACTTCAGATGGCAGATCTTGAGCAAGGAGGAGCAGCCTCTCCCCGAGCTCAGCAGCTCTTCTGAACGCGAGGGATCGGATCTGAGAAAGCGCAGGTGTTTTCGGGGGGCTTTTGGCTGCCCTTGTGCTAGTCTCAGAGGAGGAAAGTGTCCAGATTATCTGCCGATGTGCTCTGAAGGACACTTCTGATAGTAACTGGCGAGGAAGAAGGTGGGGAAAAAAGCTGCAAACTGTGACAGTCGGGAGCTCGCGCGCAAGGCTAAACATATCACTGGATTCTACGTGTATAcctcaaaaagaaaaatgtcatcTCAGACGAAGATTAAGAAAGACAAGGAGATCATTGCGGAGTATGAGACGCAAGTCAAAGAAATCCGTAATCAGTTGGTGGAGCAGTTCAAGTGCCTGGAGCAGCAATCAGAGGCTCGGATCCAGCTGTTGCAGGACCTGCAAGAGTTTTTCCGGCGTAAGGCAGAGATTCAGCTGGAGTATTCGCGCAGTCTGGAGAAACTGGCCGAAAGGTTTTCCTCAAAGATCCGTGGCCCAAGGAAAGAACAACACCTCCTCTCTTCGGTAAACTGCTGGTATCTGGTTTTGAACCAGACTCGAAGAGAAAGCAGGGATCACGCCACACTGAACGACATCTACATCAATAATGTGATCGTTCGTCTGGCTCAGATCAGCGAGGATGTCATCCGGCTCTTTAAAAAGAGTAAAGAAATTGGCATTCAGATGCACGAGGAGCTGGTGAAAGTGACGAACGAGCTGTACACTGTGATGAAGACGTATCACATGTACCACACAGAGAGCATCAGCGCCGAGAGCAAACTGAAGGATGCTGAGAAACAAGAAGAGAAGCAATTTAGCAAATCTGGAGACCTGAATGTCAACCTCCTGCGCCATGAGGACAGACCTCAGCGCCGCAGCTCGGTTCGGAAGATCGAGAAAATGAAGGAGAAGAGGCAAGCCAAGTACTCCGAGAACAAACTGAAATGCACGAAAGCCCGCAATGACTACTTATTGAACCTGGCAGCCACCAACGCAGTGGTAGCAAAATATTACATCCACGACGTCTCGGATATGATTGATTGTTGTGACCTCGGCTATCATGCTAGCTTGGCACGCACATTAAGGACGTATCTATCAGCTGAGTATAATCTGGAGACCTCTCGCCATGAAGGTTTAGACATCATTGAGAATGCCGTGGATAACCTGGACCCTCGCAGTGACAAGCACAAGATCATGGACATGTACAATCAGGTCTTCTGTCCACCCATGCGCTTTGAGTTTCTGCCGCACATGGGAGATGAGGTGTGCCAGGTTAGTGCCCAGCAGCCCGTGCAGACTGAACTGCTGATGCGTTTCCACCAGCTGCAGTCCCGATTGGCCACGCTCAAAATTGAGAACGAGGAGGTACGCAAGACCTTGGATGCCACCATGCAGACCTTACAAGACATGCTGACAGTGGAGGACTTTGATGTGTCAGATGCCTTCCAACACAGCCGATCCACTGAGTCCATTAAATCTGTGGCTTCAGAGAGTTACATGAGCAAGTTAAACATCGCAAAGAGACGAGCCAATCAGCAGGAGACAGAAGTCTTTTACTTCACTAAATTCAAGGAGTACCTGAACGGCAGTAACCTCATCATTAAGCTGCAGGCCAAGCATGACCTGCTAAAACAGACTCTGGGGGAAGGAGAAAGAGCTGAATGTGGAACTACAAGGGGAAGACGGAACGCTCGTACCCGCAACCAGGATTCAGGTCAAGCCATTCCTCTGGTGGTAGAGAGCTGCATTCGATACATCAATCTATATGGCCTGCAACAGCAAGGCATATTCAGAGTTCCTGGATCTCAGGTGGAAGTCAATGATATTAAAAATTCATTCGAAAGAGGTGAGGACCCACTGGTGGATGATCAGAGCGATCATGACATTAACTCAGTGGCAGGTGTGCTCAAGCTGTATTTCCGAGGGCTGGAAAACCCTCTGTTCCCCAAGGAACGCTTCCTGGATATGATCTCCACTGTCAAGCTTGAATCATCTGCAGAAAGAGCCCACCACATCCAGCAGATCATCGTTACCCTTCCTCGCACCGTCATCATCGTCCTGCGATACCTGTTCGCTTTTCTCAATCATCTGTCCCAGTACAGTGATGAGAACATGATGGACCCGTATAACCTTGCCATCTGTTTCGGACCCACTCTAATGCCCATCCCCGATGGTCAAGACCCCGTGGCCTGTCAGGCTCATGTTAACGAAGTCATCAAAACCATCATCATGCACAATGAGATCATCTTCCCCAGCCCGCGCGAGCTGGACGGCCCCGTCTATGAGAAGTGCATGACTGGAGGAGAGGAGTACTGTGACAGCCCTCATAGTGAACCAGGCACCATTGATGAAGCTGACAATTGCACCGAACCACACACAAGCGATGACGaaGTGGAGCAGATTGAAGCCATTGCTAAGTTCGACTACATGGGTCGGACTCCTCGAGAGTTGTCTTTCAAAAAAGGTGCATCCCTTTTGCTGTATCATCGTGCATCAGAGGACTGGTGGGAGGGCAGGCACAATGGAGTGGATGGCCTTATTCCTCACCAATATATTGTCGTACAAGATCTgGATGATGCGTTCTCTGATAGTCTGAGTCAGAAGGCTGACAGCGAGGCCAGCAGTGGACCTTTACTGGACGATAAAGCTTCATCCAAAAACGATCTGCACTCCCCATGTGAACCTTCGGCTGATTACAACTTCAGCGGGGTCATGGGCCGGGTGAGGTTGCGTTCAGATGGCTCTGCTATTCCTCGACGCCGCAGTGGCACAGACTCTCACAGTCCTCCTCGGGACACACCGCCGCGGGCCGCCGCTTGTCCCAGCAGCCCTCATAAGGTGGCCGTCAACAGGAGCCACATCGAAAGCCCTGAGAAGAGGCGTCTGGGCACGTTTGGCAGTGCAGGCAGCATTAACTACCCTGAGAGAAAGATCTACCCTGAGGGTCACCCGCTCAGACCTGTGCCTGGAGCAACAAGACACAGCAGCCTCGGAGACCACAAATCCTTAGAAGCAGAGGCTTTAGCTGAGGACATCGAGAAAACGATGAACACGGCACTTCACGAGCTCCGCGAACTAGAGCGTCAAAACACGGCCAAACAAGCTCCCGACGTGGTTCTGGACACCTTAGAACCACTCAAGAACCCAGTGAGCTCCGAACCAGCTAGTCCGCTACACACCATCATGATCCGAGACCCCGACGCGGCCCTGAGGCGCAGTAGCAGCTCCACCTCAGAGATGATGACCACCTTCAAACCGGCTCTATCCGCCAGGCTGGCTGGAGCCCAGCTCAGACCTCCACCCATGAGACCTGTCCGGCCTCCGCCAACACAGCACCGCTCCAGcagctccagctcctccggggtgGGAAGCCCGGCCATCACGCCAACCGAAAAGATCTTTCCCAACAACCCAAGCAATGCTGCGGCTTCCTCTGCCAATTCAGGAGAGAAACCTGGAACCATGTAGTCCATGGTTTTCCTGCTTTGGTGAAGGCTGACCAGATCCATGATGGAAATCAAATTCAGGAGTGGTTTtcgtttcttttctttattttggagCCCTGAAGAGTTCTGGAGGTCAGCATGTGAAGATAGAAGTCGAGTCGGCTCAGGTGATTTCCcatttttattcatcattttagACTGAAACAAAAAGCCTAAAAAGAAAGGAAAACCTTAAGACATTTTCAAGAGTAAATTTCATTcatattaatctttttttaataaataatgatgatTAGTTTTACCTCAGAATTAATATTACGTTCCTTTTTTTGGTCACGTTCTTATTTTGAACTGAGGAGGATTAAAGGAGTGGTTTGTATTCGTTTTTTTCTCTGCACTGGTTGGTTAGAGGAGTTCTGTACTCTCATTGGAGGACTGATCAAACAAGCCCCTCCCTCCAGAACTGGAccgtatgtgtatatatataatagaaaagcAACTGTCACTCAAAGACAGTCTAGCCTTTGAGCTGTTGTAAATAGAGATATACTGTACTTGAATTGTAATGCCTTTGGTTTGTAGAATAAGCGATATACTTCTAAGTAACGACATAGCCGAGCTGTATACATATATGAGATGCAGAAAATCCAATATACCAACTAATTGTAAGAAACCTGTGGTAAAATAGTAGATTTACTTGTATATACATTTTGGGGTAGATTCTTTTTTTATGTGTCGATCTTGTACAGCCGAGGACAAGAGCAGGCAAGGAGACTAGAACGACAACATTTGCAACCAATAagtaaacaaatgattaaatctaCAGTCTGAGCCATACATATTAGTTTGGGGAGTGTTTAACTTACTTTCCCCCTCCCAAAAAAACCATCAGTGAATTTTCAGTGTTCCATTCTTTATGGCATTCACATGAGCTCTGTGCAAGCATTCATACTGGAAGTTAGAATTGTGTTCCATAGCATATACTTTGTCAGCTGTTTTTTGAATATTAGTACTTTGTAATATAACCAAATGGtacatttaaaacactaaaataatagGGGAAATgtgattaattacattaaaatattaatatagcaaattaactaaaaaaactaatacaaaatatAGGTCACATTTTCATATGCAAAATGTGttttcataatttttcatattgtttttaaGATGATTTAGACATCTTTATGTGCGGTTCAACCAACAACAGTCTTGTTTATATCAGATATATGATGCCAAGCATATTCCCCACTGTAAATCTCTCATACCACCACCTAAAAACACTCATCAGACATGCTGTACAGTGCAAAGTAAATCAAATGGTCCAGTGTTATAATTGATTTAAATCCATCCACATTCTCTCTTAGTCAGGTccaaactttttcatttattcattcattttccttcggcttagtccattttttcatcaagggtcgcc
>TCONS_00063004
AGGAAAGAACAACACCTCCTCTCTTCGGTAAACTGCTGGTATCTGGTTTTGAACCAGACTCGAAGAGAAAGCAGGGATCACGCCACACTGAACGACATCTACATCAATAATGTGATCGTTCGTCTGGCTCAGATCAGCGAGGATGTCATCCGGCTCTTTAAAAAGAGTAAAGAAATTGGCATTCAGATGCACGAGGAGCTGGTGAAAGTGACGAACGAGCTGTACACTGTGAGTATAATGtctctcaatctctctctttATTTGTCCTCCTCTGGGTTCTTCTGGCTGTGCGTTTGAATGGAGCTCTCGCCCGCTGTGTGCTGCCATTCGCCATAGAAACACAGACTCTCAGGCCAAGAACAAAAACAGTTTGGCTGCGTGACAGTTTGGACAAGAAAGAAACTGTTGCTTTACGTAGTTTCTATTAGAGTATGGGAAAACTGAATGAAAGGATTGGTGTTTATAAAG
>TCONS_00063005
TGTGATCGTTCGTCTGGCTCAGATCAGCGAGGATGTCATCCGGCTCTTTAAAAAGTAAAGAAATTGGCATTCAGATGCACGAGGAGCTGGTGAAAGTGACGAACGAGCTGTACACTGTGATGAAGACGTATCACATGTACCACACAGAGAGCATCAGCGCCGAGAGCAAACTGAAGGATGCTGAGAAACAAGAAGAGAAGCAATTTAGCAAATCTGGAGACCTGAATGTCAACCTCCTGCGCCATGAGGACAGACCTCAGCGCCGCAGCTCGGTTCGGAAGATCGAGAAAATGAAGGAGAAGGTGAGATTACACTGCTGAGCTCATAATGCTCAGCGGAGAGACTCATAATGccagcttgtttttattaaggCTAGATATTGCAGGCCAaaatacagttgttgttttttcatggaCCTGTCAAATTTGAGATTTTGGGCTTTATGGCTTTTCAAAGGTTTTTTTTCAGTCTAGTGTatagaaaactaaaaaaaaaataaaaataaataataataataataaaagtcaaaaaTCTCCAATTAACTTCATATCTGTATTCTGTAGGTTTTTAAGAGGGATTTGTACATATATAATTAATCTGATTTTCTACAAAATTATATtctgttaaacatttaaaaatatatatatattattcttatGTTCTTATTGTCTGAATTTTGGACTGATAAAACAAGATTTCCAAATCTCTTTGGATAAAATCTTTGAATctattatttttaagaaaatgaaacAAGAATCTTGAACCTGGATTCATCCAGTTCTTTTTTGTCCaacagaccattttgagggatgtaaacaaaaacaatggtcccgatgtgtttcctgttttacatttttcatttctatagcttctacgaatcc
>TCONS_00063006
CGCTTTGAGTTTCTGCCGCACATGGGAGATGAGGTGTGCCAGGTTAGTGCCCAGCAGCCCGTGCAGACTGAACTGCTGATGCGTTTCCACCAGCTGCAGTCCCGATTGGCCACGCTCAAAATTGAGAACGAGGAGGTACGCAAGACCTTGGATGCCACCATGCAGACCTTACAAGACATGCTGACAGTGGAGGACTTTGATGTGTCAGATGCCTTCCAACACAGCCGATCCACTGAGTCCATTAAATCTGTGGCTTCAGAGAGTTACATGAGCAAGTTAAACATCGCAAAGAGACGAGCCAATCAGCAGGAGACAGAAGTCTTTTACTTCACTAAATTCAAGGAGTACCTGAACGGCAGTAACCTCATCATTAAGCTGCAGGCCAAGCATGACCTGCTAAAACAGACTCTGGGGGAAGGAGAAAGAGCTGAATGTGGAACTACAAGGTAAGAGAGATCTGCTGTTCATCACATtccaacaaacaaaataaagttttccAATTAGCCTCGGTGGAATCTGTGCAATAACCATATCAttac

Function

symbol description
srgap3 Predicted to be involved in negative regulation of cell migration. Predicted to act upstream of or within signal transduction. Predicted to be active in cytoplasm. Orthologous to human SRGAP3 (SLIT-ROBO Rho GTPase activating protein 3).

GO:

id name namespace
GO:0030336 negative regulation of cell migration biological_process
GO:0007165 signal transduction biological_process
GO:0005737 cytoplasm cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060524-4 Predicted to be involved in negative regulation of cell migration. Predicted to act upstream of or within signal transduction. Predicted to be active in cytoplasm. Orthologous to human SRGAP3 (SLIT-ROBO Rho GTPase activating protein 3).

Ensembl:

ensembl_id ENSDARG00000060309

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063002 False 4197 mRNA 0.51 22 41554794 41755753
TCONS_00063003 False 5100 mRNA 0.47 22 41555247 41757181
TCONS_00063004 False 468 lncRNA 0.45 2 41634069 41648856
TCONS_00063005 False 881 lncRNA 0.36 3 41634179 41670341
TCONS_00063006 True 539 lncRNA 0.48 5 41691094 41710148

Neighbor

gene id symbol gene type direction distance location
XLOC_032258 cish coding upstream 48045 41503854 ~ 41506749 (+)
XLOC_032257 twf2a coding upstream 53028 41463785 ~ 41501766 (+)
XLOC_032255 wdr82 coding upstream 93404 41452979 ~ 41461390 (+)
XLOC_032256 dre-let-7j coding upstream 99921 41454791 ~ 41454873 (+)
XLOC_032254 cplane2 coding upstream 102950 41446541 ~ 41451844 (+)
XLOC_032260 NA coding downstream 8457 41765638 ~ 41773554 (+)
XLOC_032261 NA coding downstream 21968 41779149 ~ 41788414 (+)
XLOC_032262 rad18 coding downstream 51492 41808673 ~ 41887398 (+)
XLOC_032263 NA coding downstream 139203 41896384 ~ 41915013 (+)
XLOC_032264 oxtr coding downstream 199174 41956355 ~ 41974205 (+)
XLOC_032251 AL732567.2 non-coding upstream 359993 41194687 ~ 41194801 (+)
XLOC_032245 NA non-coding upstream 471809 41080510 ~ 41082985 (+)
XLOC_032242 NA non-coding upstream 568659 40984597 ~ 40986135 (+)
XLOC_032231 NA non-coding upstream 898748 40652905 ~ 40656046 (+)
XLOC_032265 BX664752.1 non-coding downstream 240782 41997963 ~ 41998096 (+)
XLOC_032266 CU694444.1 non-coding downstream 405469 42162650 ~ 42162774 (+)

Expression


Co-expression Network