Gene
RNA
| Item | Value |
|---|---|
| gene id | G1329179 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 79716300 ~ 79716873 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1518633 | True | 212 | lncRNA | 0.58 | 3 | 79716300 | 79716873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938875 | NA | coding | upstream | 102557 | 79608818 ~ 79640460 (+) |
| LOC118938872 | large1 | coding | upstream | 423267 | 79148465 ~ 79293033 (+) |
| LOC118938871 | braf | coding | upstream | 889565 | 78780201 ~ 78826735 (+) |
| LOC118936267 | mrps33 | coding | upstream | 952312 | 78749330 ~ 78763988 (+) |
| LOC110510817 | LOC106592244 | coding | upstream | 1058081 | 78649574 ~ 78658219 (+) |
| LOC118938878 | NA | coding | downstream | 2003 | 79718876 ~ 79720972 (+) |
| LOC110511598 | LOC106595231 | coding | downstream | 122525 | 79839398 ~ 79880370 (+) |
| LOC118936540 | LOC106591976 | coding | downstream | 392207 | 80109080 ~ 80133699 (+) |
| LOC110517730 | LOC105026518 | coding | downstream | 486267 | 80203140 ~ 80213290 (+) |
| LOC110517212 | rtcb | coding | downstream | 552071 | 80268944 ~ 80284094 (+) |
| G1329176 | NA | non-coding | upstream | 6170 | 79709054 ~ 79710130 (+) |
| G1329161 | NA | non-coding | upstream | 43461 | 79667756 ~ 79672839 (+) |
| G1329160 | NA | non-coding | upstream | 48818 | 79664957 ~ 79667655 (+) |
| G1329159 | NA | non-coding | upstream | 51568 | 79663914 ~ 79664732 (+) |
| G1329186 | NA | non-coding | downstream | 11883 | 79728756 ~ 79729900 (+) |
| G1329191 | NA | non-coding | downstream | 20311 | 79737184 ~ 79737864 (+) |
| G1329193 | NA | non-coding | downstream | 23608 | 79740481 ~ 79741069 (+) |
| G1329194 | NA | non-coding | downstream | 24318 | 79741191 ~ 79741481 (+) |
| G1329153 | LOC106593057 | other | upstream | 94349 | 79618397 ~ 79621951 (+) |
| G1328968 | NA | other | upstream | 676843 | 79038604 ~ 79039457 (+) |
| G1329273 | NA | other | downstream | 268720 | 79985593 ~ 79985951 (+) |
| G1329827 | NA | other | downstream | 701591 | 80418464 ~ 80419259 (+) |
| G1329865 | NA | other | downstream | 772975 | 80489848 ~ 80490772 (+) |
| G1330026 | NA | other | downstream | 1132470 | 80849343 ~ 80869367 (+) |
| tbk1 | tbk1 | other | downstream | 1265311 | 80970502 ~ 81033922 (+) |
