G1329495


Basic Information

Item Value
gene id G1329495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 79721502 ~ 79751236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1519036
TAAATGTTACatgagatcttctctaagcattccagggatatggctctgaatatatacagcaacacctccgccaTAAGCCTTCCTGTCTCTTCTGTAAATGTTACatgagatcttctctaagcattccagggatatggctctgaatatatacagcaacacctccgccaTAAGCGTTCCCGTCTCTTCTGTAAATGTTACATCCTTGTATTTCTACTGAtgtatcatcaaattaattatctaagtgagtctcagaaatagctaatgtattaatgttatatgatgtcagcaagttattgatttcaagGAAAGAAACGAGTTTCGCTTCGGTAAACAATGGCCCTCTCTGTCATGTCCAAAGGGAAATGGGTTGAGCAGTTTAAACTAACATAATCGATCTGTTGAACTGAAGTTAATGATCCTGGTTTTATTTCCAAACGGTTCTAAAGGGAATCTTTGTGTGACTGGATCAATAACAGGAAGGAACACTGAAACACTAACCTATGTCCCCAGTGGTacccctggtctatagtagtgcactatatagggaatagggctctggtctagagtagtgcactatatagggaataggcttctggtctagagtagtgcactatatagggaatagggctctcgtcaatagtagtgcactatatagggaataaggctctggtctatagtagtgcactatatagggaatagggctctggtctatagtagtgcactatatagggaatagggctctgatatatagtagtgcactatatagggaatagggctctggtctatagtagtgcactatatagggaaaagggctctggtctaaagtagtgcactatacagggaatagggctctggtctaaagtagtgcactatacacagggaatagggctctggtctaaagtagtgtactatataacaatagggctctggtctatagtagtgcactatatagggaatagggctctggtctaaagtagtgtactatataccaatagggctctggtctatagtagtgcactatatagggaatagggctctggtctatagtagtgtactatatggggaatagggctctggtctatagtagtgtgctacatagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtgtactatatagcaatagggctctggtctatagtagtgcactatatagggaatagggctctggtctatagtagtgtactatatagggaatagggctctggtctatagtagtgtgctacatagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggaaaagggctctggtctaaagtagtgtactatatagggaataggggtctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtggaccatatagggaatagggctctggtctaagctAGTGCACTataagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatacaggggaaGCAGGCCAAGGTAGCGCCACCACCTCCTGCACTGTGAGCTCTTCATGGTTGACCGGCCGGCAGAATAACAATGATGTCTCTCTGTGACGTCTCCTGAGACCGCTCTCTACCGTCTcgtctcttctctcacctctctctgcctagcaACAGGGGGAAGCAACACCTTCAGAATACGATGCTTCACAAAGAGTTGGAAACTATGGAAGAGACTGAGAATTAACTCCGCTTTCTGCTTCAAAACAGTGACTCAGAGGACGATATGGAAGAGACTGAGAATTAactcaaagaagccaccctttgccttgatgaaagctttacACACtttcggcattctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattgacaggtgtgccttgttaaaagttaatttgtggaattgttttccttcttaatgcgtttgagtcaatcagtagtgttgtgaagatagccctatttggtaaaagaccaagtccatattttggcagcccaaataaatgcttcacagagttcaagtaacagacacatctcaacatcaactgttcagaggagactgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1519036 True 2153 lncRNA 0.43 2 79721502 79751236

Neighbor

gene id symbol gene type direction distance location
LOC118938877 LOC106594098 coding downstream 26033 79691618 ~ 79695469 (-)
LOC118938876 NA coding downstream 30197 79667754 ~ 79691305 (-)
LOC110513674 LOC106593057 coding downstream 98076 79618502 ~ 79623426 (-)
LOC118938874 NA coding downstream 108631 79609180 ~ 79612871 (-)
LOC110536863 LOC105029310 coding downstream 232374 79487003 ~ 79489128 (-)
LOC110510401 LOC106592932 coding upstream 159446 79910682 ~ 80084406 (-)
LOC110510850 NA coding upstream 383718 80133088 ~ 80139431 (-)
LOC110510397 LOC106596262 coding upstream 399781 80151017 ~ 80231658 (-)
LOC118938879 LOC106591974 coding upstream 400867 80152103 ~ 80153698 (-)
LOC118938880 NA coding upstream 471785 80223008 ~ 80224268 (-)
G1329527 NA non-coding downstream 357 79719561 ~ 79721145 (-)
G1329514 NA non-coding downstream 42154 79675523 ~ 79679348 (-)
G1329494 NA non-coding downstream 113927 79605318 ~ 79607575 (-)
G1329538 NA non-coding upstream 18565 79769801 ~ 79838810 (-)
G1329542 NA non-coding upstream 25412 79776648 ~ 79777232 (-)
G1329545 NA non-coding upstream 47181 79798417 ~ 79798734 (-)
G1329548 NA non-coding upstream 54278 79805514 ~ 79806928 (-)
G1329549 NA non-coding upstream 57562 79808798 ~ 79811079 (-)
G1329481 NA other downstream 153530 79567334 ~ 79567972 (-)
G1329475 NA other downstream 178349 79542794 ~ 79543153 (-)
G1329004 NA other downstream 645966 79075290 ~ 79075536 (-)
G1328987 NA other downstream 690546 79029667 ~ 79030956 (-)
G1329577 NA other upstream 128172 79879408 ~ 79880360 (-)
LOC110517959 LOC106593769 other upstream 506311 80242189 ~ 80268839 (-)

Expression


Co-expression Network