Gene
RNA
| Item | Value |
|---|---|
| gene id | G1329539 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 79831666 ~ 79833240 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proline-rich extensin-like protein EPR1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1519113 | True | 344 | lncRNA | 0.40 | 2 | 79831666 | 79833240 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938877 | LOC106594098 | coding | downstream | 136197 | 79691618 ~ 79695469 (-) |
| LOC118938876 | NA | coding | downstream | 140361 | 79667754 ~ 79691305 (-) |
| LOC110513674 | LOC106593057 | coding | downstream | 208240 | 79618502 ~ 79623426 (-) |
| LOC118938874 | NA | coding | downstream | 218795 | 79609180 ~ 79612871 (-) |
| LOC110536863 | LOC105029310 | coding | downstream | 342538 | 79487003 ~ 79489128 (-) |
| LOC110510401 | LOC106592932 | coding | upstream | 77442 | 79910682 ~ 80084406 (-) |
| LOC110510850 | NA | coding | upstream | 301714 | 80133088 ~ 80139431 (-) |
| LOC110510397 | LOC106596262 | coding | upstream | 317777 | 80151017 ~ 80231658 (-) |
| LOC118938879 | LOC106591974 | coding | upstream | 318863 | 80152103 ~ 80153698 (-) |
| LOC118938880 | NA | coding | upstream | 389781 | 80223008 ~ 80224268 (-) |
| G1329549 | NA | non-coding | downstream | 20587 | 79808798 ~ 79811079 (-) |
| G1329548 | NA | non-coding | downstream | 24738 | 79805514 ~ 79806928 (-) |
| G1329545 | NA | non-coding | downstream | 32932 | 79798417 ~ 79798734 (-) |
| G1329542 | NA | non-coding | downstream | 54434 | 79776648 ~ 79777232 (-) |
| G1329495 | NA | non-coding | downstream | 80430 | 79721502 ~ 79751236 (-) |
| G1329562 | NA | non-coding | upstream | 8074 | 79841314 ~ 79842116 (-) |
| G1329565 | NA | non-coding | upstream | 13137 | 79846377 ~ 79847087 (-) |
| G1329570 | NA | non-coding | upstream | 25809 | 79859049 ~ 79859479 (-) |
| G1329577 | NA | non-coding | upstream | 46168 | 79879408 ~ 79880360 (-) |
| G1329555 | NA | non-coding | upstream | 72188 | 79905428 ~ 79905749 (-) |
| G1329481 | NA | other | downstream | 263694 | 79567334 ~ 79567972 (-) |
| G1329475 | NA | other | downstream | 288513 | 79542794 ~ 79543153 (-) |
| G1329004 | NA | other | downstream | 756130 | 79075290 ~ 79075536 (-) |
| G1328987 | NA | other | downstream | 800710 | 79029667 ~ 79030956 (-) |
| LOC110517959 | LOC106593769 | other | upstream | 424307 | 80242189 ~ 80268839 (-) |
