G1329554


Basic Information

Item Value
gene id G1329554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 79909279 ~ 79910086 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1519135
agggctctggtctaaagtagtgcactatatagggaatagggtgccatttgggactcactaGAAGTATCCATGCCACGTGGCCACCTGTCACAGAGACATTGAAGACAGCGGGGGTTTCTttaagacgaagaagaagaagaggtcaGAGACTCCATTGAAACCATTGAATATTAGTGAACCGTACGGTTGAAGAGCTGCAGGGGGATGAACGAGAAACACACTAAAAAAACACATCTTCCTTTTCACTACATTTCATGATGAGTATTTTTTAAACCCAACACCTACAGTGCTTAcgagatttattttatttatagttTTATTTTTCTTTTGGTATTTATTATTGTAATTATTCATGTTTCTTGGCCTTAATGTATTTACTCGGACCGTAAAGAAGCTAGATCACAGTGCTGCAAATTAAATAGGTATTTTCTGTGTGGCCCGaaaaatattttagatttttttttgttattttataaACTGGTATAATATTTGTTCtgcatatatagagagagagcgagacaacaCTAGAGTAGTTAGTTACAAATGAACAATGGAAGGA
>TU1519136
gtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggaatagggctctggtctaaagtagtgcactatatagggaataggcctctggtctaaagtagtgcactatataggggggaatagggccctggtctaaagtagtgcactatatagggaataggcctctggtctaaagtagtgcacaatatagggaataggcctctggtctaaagtagtgcactatataggggggaatagggctctggtctaaagtagtgcactatatagggaatagggtgccatttgggactcactaGAAGTATCCATGCCACGTGGCCACCTGTCACAGAGACATTGAAGACAGCGGGGGTTTCTttaagacgaagaagaagaagaggtcaGAGACTCCATTGAAACCATTGAATATTAGTGAACCGTACGGTTGAAGAGCTGCAGGGGGATGAACGAGAAACACACTAAAAAAACACATCTTCCTTTTCACTACATTTCATGATGAGTATTTTTTAAACCCAACACCTACAGTGCTTAcgagatttattttatttatagttTTATTTTTCTTTTGGTATTTATTATTGTAATTATTCATGTTTCTTGGCCTTAATGTATTTACTCGGACCGTAAAGAAGCTAGATCACAGTGCTGCAAATTAAATAGGTATTTTCTGTGTGGCCCGaaaaatattttagatttttttttgttattttataaACTGGTATAATATTTGTTCtgcatatatagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1519135 False 559 lncRNA 0.36 1 79909279 79909837
TU1519136 True 762 lncRNA 0.39 1 79909325 79910086

Neighbor

gene id symbol gene type direction distance location
LOC118938877 LOC106594098 coding downstream 213810 79691618 ~ 79695469 (-)
LOC118938876 NA coding downstream 217974 79667754 ~ 79691305 (-)
LOC110513674 LOC106593057 coding downstream 285853 79618502 ~ 79623426 (-)
LOC118938874 NA coding downstream 296408 79609180 ~ 79612871 (-)
LOC110536863 LOC105029310 coding downstream 420151 79487003 ~ 79489128 (-)
LOC110510401 LOC106592932 coding upstream 596 79910682 ~ 80084406 (-)
LOC110510850 NA coding upstream 224868 80133088 ~ 80139431 (-)
LOC110510397 LOC106596262 coding upstream 240931 80151017 ~ 80231658 (-)
LOC118938879 LOC106591974 coding upstream 242017 80152103 ~ 80153698 (-)
LOC118938880 NA coding upstream 312935 80223008 ~ 80224268 (-)
G1329553 NA non-coding downstream 1530 79905904 ~ 79907749 (-)
G1329555 NA non-coding downstream 3530 79905428 ~ 79905749 (-)
G1329577 NA non-coding downstream 28919 79879408 ~ 79880360 (-)
G1329570 NA non-coding downstream 49800 79859049 ~ 79859479 (-)
G1329565 NA non-coding downstream 62192 79846377 ~ 79847087 (-)
G1329580 NA non-coding upstream 10796 79920882 ~ 79923651 (-)
G1329581 NA non-coding upstream 23815 79933901 ~ 79934240 (-)
G1329586 NA non-coding upstream 44043 79954129 ~ 79954556 (-)
G1329587 NA non-coding upstream 50815 79960901 ~ 79961163 (-)
G1329481 NA other downstream 341307 79567334 ~ 79567972 (-)
G1329475 NA other downstream 366126 79542794 ~ 79543153 (-)
G1329004 NA other downstream 833743 79075290 ~ 79075536 (-)
LOC110517959 LOC106593769 other upstream 347461 80242189 ~ 80268839 (-)
LOC110516867 LOC106594631 other upstream 395215 80286961 ~ 80347887 (-)

Expression


Co-expression Network