G1329580


Basic Information

Item Value
gene id G1329580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 79920882 ~ 79923651 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1519173
acaacactactgaatgacatctgaatataacaacactactgaattacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactattacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacacttacataatgacatctgactataacaacactacagaatgatatctgactataacaacactacttaATGACATCTgaatataacaacactactgaatgacatctgactataacaacactactgaacgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgatatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactggatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgatatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactggatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacgtctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgatatCTGACTATGACAACACTACTGaacgacatctgactataacaacactacagaatgatatctgactataacaacactactgaatgacatctgactataacaacactactgaataacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaacgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctcctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgacaataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctgaatataacaacactactgaattacatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactattacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgattgacatctgactataacaacacttacatattgacatctgactataacaacactacagaatgatatctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataacaacactactgaacgacatctgactataacaacactactgaatgacgtctgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctactgactataacaacactactgaatgacatctactgactataacaacactactgaatgatatctactgactataacaacactactgaatgacatctgactataacaacactactgaatgacatctgactataac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1519173 True 2770 lncRNA 0.34 1 79920882 79923651

Neighbor

gene id symbol gene type direction distance location
LOC118938877 LOC106594098 coding downstream 225413 79691618 ~ 79695469 (-)
LOC118938876 NA coding downstream 229577 79667754 ~ 79691305 (-)
LOC110513674 LOC106593057 coding downstream 297456 79618502 ~ 79623426 (-)
LOC118938874 NA coding downstream 308011 79609180 ~ 79612871 (-)
LOC110536863 LOC105029310 coding downstream 431754 79487003 ~ 79489128 (-)
LOC110510850 NA coding upstream 211303 80133088 ~ 80139431 (-)
LOC110510397 LOC106596262 coding upstream 227366 80151017 ~ 80231658 (-)
LOC118938879 LOC106591974 coding upstream 228452 80152103 ~ 80153698 (-)
LOC118938880 NA coding upstream 299370 80223008 ~ 80224268 (-)
LOC118938881 LOC106593769 coding upstream 311479 80235130 ~ 80241078 (-)
G1329554 NA non-coding downstream 10796 79909279 ~ 79910086 (-)
G1329553 NA non-coding downstream 13133 79905904 ~ 79907749 (-)
G1329555 NA non-coding downstream 15133 79905428 ~ 79905749 (-)
G1329577 NA non-coding downstream 40522 79879408 ~ 79880360 (-)
G1329570 NA non-coding downstream 61403 79859049 ~ 79859479 (-)
G1329581 NA non-coding upstream 10250 79933901 ~ 79934240 (-)
LOC110510401 LOC106592932 non-coding upstream 20198 79910682 ~ 80084406 (-)
G1329586 NA non-coding upstream 30478 79954129 ~ 79954556 (-)
G1329587 NA non-coding upstream 37250 79960901 ~ 79961163 (-)
G1329590 NA non-coding upstream 43968 79967619 ~ 79968514 (-)
G1329481 NA other downstream 352910 79567334 ~ 79567972 (-)
G1329475 NA other downstream 377729 79542794 ~ 79543153 (-)
G1329004 NA other downstream 845346 79075290 ~ 79075536 (-)
LOC110517959 LOC106593769 other upstream 333896 80242189 ~ 80268839 (-)
LOC110516867 LOC106594631 other upstream 381650 80286961 ~ 80347887 (-)
G1329752 NA other upstream 424610 80348261 ~ 80354313 (-)

Expression


Co-expression Network