G1329590


Basic Information

Item Value
gene id G1329590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 79967619 ~ 79968514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1519183
gacctggttgatgaggagatgagagggtcagtaaaacccagaactgacctggttgatgaggagagggtcagtaaaacccagatctgacctggttgatgaggagagaggagagggtcagtaaaacccagaactgacctggttgatgcggagagaggagagggtcagtaaaacccagatCTGACCTGGATgatgaggagagggtcagtaaaacccagaactgacctggttgatgaggagatgagagggtcagtaaaacccagaactgacctggttgatgaggagagggtcagtaaaacccagatctgacctggttgatgaggagagaggagagggtcagtaaaacccagaactgacctggttgatgaggagagaggagagagtcagtaaAACCTagaactgacctggttgatgaggagagggacagtaaaacccagatctgacctggttgatgaggagagaggagagggtcagtaaaacccagagctgacctggttgatgaggagagagTCAGTAAAACCAagaactgacctggttgatgaggagatgagagggtcagtaaaacccagaactgacctggttgatgaggagagggtcagtaaaacccagatctgacctggttgatgaggagagaggagagggtcagtaaaacccagaactgacctggttgatgcggagagaggagagggtcagtaaaacccagaactgacctggttgatgaggagagggtcagtaaaacccagatctgacctggttgatgaggagagaggagagggtcagtaaaacccagaactgacctggttaatgcggagagaggagagggtcagtaaaacccagatctggcctggttgatgaggagagggtcagtaaaacccagaactgacctggttgatgaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1519183 True 896 lncRNA 0.50 1 79967619 79968514

Neighbor

gene id symbol gene type direction distance location
LOC118938877 LOC106594098 coding downstream 272150 79691618 ~ 79695469 (-)
LOC118938876 NA coding downstream 276314 79667754 ~ 79691305 (-)
LOC110513674 LOC106593057 coding downstream 344193 79618502 ~ 79623426 (-)
LOC118938874 NA coding downstream 354748 79609180 ~ 79612871 (-)
LOC110536863 LOC105029310 coding downstream 478491 79487003 ~ 79489128 (-)
LOC110510850 NA coding upstream 166440 80133088 ~ 80139431 (-)
LOC110510397 LOC106596262 coding upstream 182503 80151017 ~ 80231658 (-)
LOC118938879 LOC106591974 coding upstream 183589 80152103 ~ 80153698 (-)
LOC118938880 NA coding upstream 254507 80223008 ~ 80224268 (-)
LOC118938881 LOC106593769 coding upstream 266616 80235130 ~ 80241078 (-)
G1329587 NA non-coding downstream 6456 79960901 ~ 79961163 (-)
LOC110510401 LOC106592932 non-coding downstream 10510 79910682 ~ 80084406 (-)
G1329586 NA non-coding downstream 13063 79954129 ~ 79954556 (-)
G1329581 NA non-coding downstream 33379 79933901 ~ 79934240 (-)
G1329580 NA non-coding downstream 43968 79920882 ~ 79923651 (-)
G1329592 NA non-coding upstream 3732 79972246 ~ 79972462 (-)
G1329593 NA non-coding upstream 3998 79972512 ~ 79972821 (-)
G1329595 NA non-coding upstream 5997 79974511 ~ 79974806 (-)
G1329598 NA non-coding upstream 8905 79977419 ~ 79977668 (-)
G1329599 NA non-coding upstream 9435 79977949 ~ 79978402 (-)
G1329577 NA other downstream 87259 79879408 ~ 79880360 (-)
G1329481 NA other downstream 399647 79567334 ~ 79567972 (-)
G1329475 NA other downstream 424466 79542794 ~ 79543153 (-)
LOC110517959 LOC106593769 other upstream 289033 80242189 ~ 80268839 (-)
LOC110516867 LOC106594631 other upstream 336787 80286961 ~ 80347887 (-)
G1329752 NA other upstream 379747 80348261 ~ 80354313 (-)

Expression


Co-expression Network